RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-206	ENST00000562791	PLIN3	O60664	434 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	SDC3	O75056	442 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	KCNK2	O95069	426 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	C22orf31	O95567	290 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CHRNG	P07510	517 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MMP10	P09238	476 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	FAM86B2	P0C5J1	330 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	IFI30	P13284	250 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PAX1	P15863	534 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ERCC2	P18074	760 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	LBP	P18428	481 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PTN	P21246	168 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CBL	P22681	906 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ABCD3	P28288	659 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	LCN1	P31025	176 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	AHR	P35869	848 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CDH8	P55286	799 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GNA12	Q03113	381 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MBTD1	Q05BQ5	628 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	SLA	Q13239	276 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	NAE1	Q13564	534 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GPR176	Q14439	515 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GANAB	Q14697	944 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	HEPACAM	Q14CZ8	416 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PDK1	Q15118	436 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GOLGA7B	Q2TAP0	167 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	RFX4	Q33E94	735 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ZNF528	Q3MIS6	628 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791		Q5BKY6	102 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	C6orf52	Q5T4I8	152 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PIP5KL1	Q5T9C9	394 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MEDAG	Q5VYS4	303 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	TRNP1	Q6NT89	227 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	DLEU7	Q6UYE1	221 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	WASH2P	Q6VEQ5	465 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ASB18	Q6ZVZ8	466 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	KCTD8	Q6ZWB6	473 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	C1orf186	Q6ZWK4	172 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	SLC16A14	Q7RTX9	510 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MRPL52	Q86TS9	123 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	VASH2	Q86V25	355 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	COMMD7	Q86VX2	200 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	UBQLNL	Q8IYU4	475 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	RDH10	Q8IZV5	341 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GPR137C	Q8N3F9	429 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	RASGEF1C	Q8N431	466 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MINDY1	Q8N5J2	469 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ACBD4	Q8NC06	268 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CHDH	Q8NE62	594 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	OR5D18	Q8NGL1	313 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	OR9A2	Q8NGT5	310 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	OR4K15	Q8NH41	348 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	FIBIN	Q8TAL6	211 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	NDNF	Q8TB73	568 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ITFG1	Q8TB96	612 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ACTL9	Q8TC94	416 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GRHL3	Q8TE85	626 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CA5BP1	Q8WTZ4	195 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	P2RX5	Q93086	422 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	FBXO32	Q969P5	355 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PPWD1	Q96BP3	646 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	L3HYPDH	Q96EM0	354 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	RNF125	Q96EQ8	232 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	SLC41A2	Q96JW4	573 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	BTN2A3P	Q96KV6	586 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	HSFY1	Q96LI6	401 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	TAAR6	Q96RI8	345 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	KCNA7	Q96RP8	456 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	HBEGF	Q99075	208 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	LGMN	Q99538	433 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	P2RY13	Q9BPV8	354 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	FAM110A	Q9BQ89	295 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	DCUN1D5	Q9BTE7	237 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	THUMPD3	Q9BV44	507 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GGACT	Q9BVM4	153 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	APOL6	Q9BWW8	343 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ANGPTL4	Q9BY76	406 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ACTR6	Q9GZN1	396 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MFF	Q9GZY8	342 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	GFRA4	Q9GZZ7	299 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	COQ10B	Q9H8M1	238 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CENPM	Q9NSP4	180 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MAN2C1	Q9NTJ4	1040 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PLEK2	Q9NYT0	353 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PEF1	Q9UBV8	284 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	KLHL21	Q9UJP4	597 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	PADI3	Q9ULW8	664 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	CA5B	Q9Y2D0	317 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	KLHL20	Q9Y2M5	609 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	LOXL2	Q9Y4K0	774 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	A2M	P01023	1474 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	FAM205A	Q6ZU69	1335 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	SYCP2	Q9BX26	1530 aa		4.16	□□□□□ -1.74
CHD9-206	ENST00000562791	ARHGEF10	O15013	1369 aa		4.15	□□□□□ -1.74
CHD9-206	ENST00000562791	CNTNAP1	P78357	1384 aa		4.15	□□□□□ -1.74

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