RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 RP9Q8TA86 221 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 ZPLD1Q8TCW7 415 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 CNOT9Q92600 299 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 RNF145Q96MT1 663 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 TUBA1CQ9BQE3 449 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 KAT8Q9H7Z6 458 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 ALKBH4Q9NXW9 302 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 ZNF443Q9Y2A4 671 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 CHST2Q9Y4C5 530 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 AP4B1Q9Y6B7 739 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 PCNX1Q96RV3 2341 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 DNAJC13O75165 2243 aa13.98□□□□□ -0.17
RABGGTA-219ENST00000560871 FREM3P0C091 2139 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 LOC100653049A0A140TA62 436 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 TMEM247A6NEH6 219 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 CD8B2A6NJW9 211 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 H0Y3Z8 333 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 H0YC42 278 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 KRT34O76011 436 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 TOXO94900 526 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 NUDT14O95848 222 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 EPPINO95925 133 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 NPPAP01160 153 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 ELK4P28324 431 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 ADH6P28332 368 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 CCR4P51679 360 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 SUCLG1P53597 346 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 TPD52P55327 224 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 EEF1A1P68104 462 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 CDK6Q00534 326 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 CYLC2Q14093 348 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 QPRTQ15274 297 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 MMEL1Q495T6 779 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 LIN52Q52LA3 116 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 MRPL2Q5T653 305 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 NANOGP8Q6NSW7 305 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 LACC1Q8IV20 430 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 PEX5LQ8IYB4 626 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 POU5F2Q8N7G0 328 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 OR8J3Q8NGG0 315 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 OR52P1PQ8NH57 321 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 UCN2Q96RP3 112 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 THUMPD3Q9BV44 507 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 RSPO3Q9BXY4 272 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 NANOGQ9H9S0 305 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 CLCF1Q9UBD9 225 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 GPC6Q9Y625 555 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 TEX15Q9BXT5 2789 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 ITPR2Q14571 2701 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 HCFC1P51610 2035 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 PCNX3Q9H6A9 2034 aa13.97□□□□□ -0.17
RABGGTA-219ENST00000560871 CDHR4A6H8M9 788 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 MBD3L4A6NDZ8 208 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 MBD3L3A6NE82 208 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 MBD3L5A6NJ08 208 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 C19orf84I3L1E1 186 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 SHOX2O60902 331 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 CYP7B1O75881 506 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 COX4I1P13073 169 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 ETS2P15036 469 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 IL7RP16871 459 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 PGCP20142 388 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 IL11P20809 199 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 EIF1P41567 113 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 GZMMP51124 257 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 CLDN20P56880 219 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 RBBP4Q09028 425 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 PMPCAQ10713 525 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 SCARB2Q14108 478 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 RIPPLY2Q5TAB7 128 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 SERPINA11Q86U17 422 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 GRAMD2AQ8IUY3 354 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 PCYOX1LQ8NBM8 494 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 MBD3L2Q8NHZ7 208 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 FBXO27Q8NI29 283 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 ST8SIA1Q92185 356 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 RND1Q92730 232 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 RCN3Q96D15 328 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 MRGPRX4Q96LA9 322 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 TRIB1Q96RU8 372 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 RNF6Q9Y252 685 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 CACNA1CQ13936 2221 aa13.96□□□□□ -0.17
RABGGTA-219ENST00000560871 ARHGAP21Q5T5U3 1957 aa13.96□□□□□ -0.18
RABGGTA-219ENST00000560871 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.18
RABGGTA-219ENST00000560871 A0A0G2JNJ9 132 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 CLCA1A8K7I4 914 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 C5orf58C9J3I9 102 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 AP3D1O14617 1153 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 SEC14L5O43304 696 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 EFNA2O43921 213 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 PABPC4LP0CB38 370 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 CEACAM8P31997 349 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 TIMP3P35625 211 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 PCBP3P57721 371 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 RAC1P63000 192 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 SRYQ05066 204 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms