RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NDRG2Q9UN36 371 aaKnown RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 A4GNTQ9UNA3 340 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC6A5Q9Y345 797 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SAMHD1Q9Y3Z3 626 aaKnown RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ATG4BQ9Y4P1 393 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 CDH10Q9Y6N8 788 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 LOC390937A0A1W2PQ73 354 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TCRBV21S2A2A0A5A6 115 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 MEGF11A6BM72 1044 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 HELTA6NFD8 242 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 NEMP2A6NFY4 417 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF729A6NN14 1252 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 MAGEB17A8MXT2 336 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 UBFD1O14562 309 aaKnown RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 CTAG2O75638 210 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 DHFRP00374 187 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PTHP01270 115 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ESR1P03372 595 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 VIPR1P32241 457 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TRHRP34981 398 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 RORAP35398 523 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SPAM1P38567 509 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 MRPL19P49406 292 aaKnown RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PGGT1BP53609 377 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 CRISP3P54108 245 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 DMWDQ09019 674 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 DMC1Q14565 340 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TRAM2Q15035 370 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ALKBH6Q3KRA9 238 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 QSOX2Q6ZRP7 698 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SHFQ7M4L6 423 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 KCNMB4Q86W47 210 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ENTHD1Q8IYW4 607 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 LIX1Q8N485 282 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 KLHL36Q8N4N3 616 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 COLGALT1Q8NBJ5 622 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 OR11H7Q8NGC8 314 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 OR56B1Q8NGI3 324 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM143Q96AN5 459 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 DIRAS2Q96HU8 199 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC38A2Q96QD8 506 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PITX2Q99697 317 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TRMOQ9BU70 441 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PDCD10Q9BUL8 212 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC39A8Q9C0K1 460 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 MIXL1Q9H2W2 232 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 CALHM2Q9HA72 323 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 LMAN1LQ9HAT1 526 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SLCO1C1Q9NYB5 712 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 FBXL2Q9UKC9 423 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PADI2Q9Y2J8 665 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 UBE2J1Q9Y385 318 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PLXNA1Q9UIW2 1896 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 A8MT66 165 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TLX3O43711 291 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PEX10O60683 326 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 B4GALT2O60909 372 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SAP30O75446 220 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 NDUFS3O75489 264 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PGK1P00558 417 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 NMBP08949 121 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC2A2P11168 524 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RAB3BP20337 219 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 OGNP20774 298 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 STOMP27105 288 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RFC3P40938 356 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ZFP36L2P47974 494 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DAPP51397 102 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RIDAP52758 137 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RRADP55042 308 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RAB10P61026 200 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 STX4Q12846 297 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SERTAD4-AS1Q5TG53 156 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 NADSYN1Q6IA69 706 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RPS27LQ71UM5 84 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM132CQ8N3T6 1108 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SPATA6LQ8N4H0 392 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DNAJC22Q8N4W6 341 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 C12orf45Q8N5I9 185 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 BEND2Q8NDZ0 799 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 OR52B4Q8NGK2 314 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 GGHQ92820 318 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC38A3Q99624 504 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PIGMQ9H3S5 423 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 MAGIXQ9H6Y5 334 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 IMPAD1Q9NX62 359 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 MYEF2Q9P2K5 600 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SEC14L4Q9UDX3 406 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 A6NNC1 897 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 E9PQ18 207 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 CHRM4P08173 479 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 HOXB6P17509 224 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ACADLP28330 430 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 GPX4P36969 197 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 EIF2S3P41091 472 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 GPR143P51810 404 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 CLDN2P57739 230 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 CDH18Q13634 790 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ALKBH1Q13686 389 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms