RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 IL2RGP31785 369 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 APOBEC3AP31941 199 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 MAP3K8P41279 467 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 PRIM2P49643 509 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 CDH13P55290 713 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 ACTG1P63261 375 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 RASGEF1BQ0VAM2 473 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 ZFP90Q8TF47 636 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 UBLCP1Q8WVY7 318 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 HOXB13Q92826 284 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 APIPQ96GX9 242 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 TRMOQ9BU70 441 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 C1QTNF6Q9BXI9 259 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 EBPLQ9BY08 206 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 SHCBP1LQ9BZQ2 653 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 GLIPR2Q9H4G4 154 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 MYNNQ9NPC7 610 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 NTMQ9P121 344 aa11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 PSMC3IPQ9P2W1 217 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-213ENST00000560127 GJE1A6NN92 205 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF724A8MTY0 619 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 MANBAO00462 879 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 CYTIPO60759 359 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 OR4F21O95013 312 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 OTCP00480 354 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 DDCP20711 480 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 TIA1P31483 386 aaKnown RBP eCLIP11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 RAC3P60763 192 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 CD226Q15762 336 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 ZSWIM7Q19AV6 140 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 ANKS4BQ8N8V4 417 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 ATP6V1C2Q8NEY4 427 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 FBXO27Q8NI29 283 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 GPR151Q8TDV0 419 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF483Q8TF39 744 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 FBXO17Q96EF6 278 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 AMDHD1Q96NU7 426 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 PARD6BQ9BYG5 372 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 ACPTQ9BZG2 426 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 EQTNQ9NQ60 294 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 TMEM216Q9P0N5 145 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 TBK1Q9UHD2 729 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 RAB21Q9UL25 225 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 TRAF6Q9Y4K3 522 aa11.22□□□□□ -0.61
RABGGTA-213ENST00000560127 A0A1W2PNR3 127 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 CIB4A0PJX0 185 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 SMIM23A6NLE4 172 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 TTC36A6NLP5 189 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 A8MT66 165 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 OIP5O43482 229 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 NKX2-2O95096 273 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 IGHV3-9P01782 118 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 NUDT17P0C025 328 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 PHC1P78364 1004 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 ACSM2AQ08AH3 577 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 C2orf80Q0P641 193 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 PRR31Q5SQ13 230 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 ACSM2BQ68CK6 577 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 GALNT18Q6P9A2 607 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 RINLQ6ZS11 566 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 GALNT5Q7Z7M9 940 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF100Q8IYN0 542 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 ZNF524Q96C55 264 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 MYOZ1Q9NP98 299 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 TAS2R7Q9NYW3 318 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 GRID1Q9ULK0 1009 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 TMCO1Q9UM00 188 aa11.21□□□□□ -0.61
RABGGTA-213ENST00000560127 NPIPA5A0A0B4J1W7 369 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 FAM157AC9JC47 383 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 NPIPA7E9PJI5 369 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 ATP6V1G2-DDX39BF2Z307 99 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 LILRA1O75019 489 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 KCNK2O95069 426 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 ANXA4P09525 319 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 NPIPA8P0DM63 369 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 FOXG1P55316 489 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 DEFA6Q01524 100 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF117Q03924 483 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 RASA2Q15283 850 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 TOMM34Q15785 309 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 TSNAXIP1Q2TAA8 658 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 SPIN4Q56A73 249 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 FBXW9Q5XUX1 488 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 EMBQ6PCB8 327 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 CBLN3Q6UW01 205 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 DEF8Q6ZN54 512 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 MREGQ8N565 214 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 LINC01356Q8N9X3 169 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 WDR31Q8NA23 367 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF540Q8NDQ6 660 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 HPS1Q92902 700 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 MRGPRX4Q96LA9 322 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms