RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 MARCH9Q86YJ5 346 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 ABHD12Q8N2K0 398 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 GTPBP8Q8N3Z3 284 aaPredicted RBP2.96□□□□□ -1.94
SPG11-218ENST00000559754 ALLCQ8N6M5 410 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.96□□□□□ -1.94
SPG11-218ENST00000559754 ZPLD1Q8TCW7 415 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 ELMO1Q92556 727 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 LHX4Q969G2 390 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 SLC38A4Q969I6 547 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 TOMM40LQ969M1 308 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 C18orf25Q96B23 403 aaPredicted RBP2.96□□□□□ -1.94
SPG11-218ENST00000559754 C10orf35Q96D05 121 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 LRRC39Q96DD0 335 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 PANX1Q96RD7 426 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 SLC6A7Q99884 636 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 SIKE1Q9BRV8 207 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 CENPKQ9BS16 269 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 TUBB1Q9H4B7 451 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 HAUS4Q9H6D7 363 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 SUDS3Q9H7L9 328 aaPredicted RBP2.96□□□□□ -1.94
SPG11-218ENST00000559754 VCPKMTQ9H867 229 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 Q9HAA7 133 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 NMUR1Q9HB89 426 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 ZNF160Q9HCG1 818 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 POLE4Q9NR33 117 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 ZNHIT6Q9NWK9 470 aaKnown RBP2.96□□□□□ -1.94
SPG11-218ENST00000559754 GCNT4Q9P109 453 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 CTSZQ9UBR2 303 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 ABCG2Q9UNQ0 655 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 RASD1Q9Y272 281 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 STK38LQ9Y2H1 464 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 EXOSC1Q9Y3B2 195 aaKnown RBP2.96□□□□□ -1.94
SPG11-218ENST00000559754 TIMM10BQ9Y5J6 103 aa2.96□□□□□ -1.94
SPG11-218ENST00000559754 GRIN2DO15399 1336 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 FRMPD4Q14CM0 1322 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 TRAV25A0A0B4J276 109 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 A0A1W2PNU3 283 aaPredicted RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 A0A1W2PPE3 182 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 ZNF840PA6NDX5 716 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 FRG2CA6NGY1 282 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 TMCO5BA8MYB1 307 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 GOLGA8TH3BQL2 631 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 MSH4O15457 936 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 TAPBPO15533 448 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 RANBP6O60518 1105 aaKnown RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 OAS1P00973 400 aaKnown RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 CRYGCP07315 174 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 CCDC172P0C7W6 258 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 ETS2P15036 469 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 XRCC1P18887 633 aaPredicted RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 TNNI1P19237 187 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 MSR1P21757 451 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 MMP11P24347 488 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 PDHA2P29803 388 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 RPL9P32969 192 aaKnown RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 FDFT1P37268 417 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 CRYBB1P53674 252 aaPredicted RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 CDH6P55285 790 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 C1orf61Q13536 156 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 CRMP1Q14194 572 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 UBE2V2Q15819 145 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 CHRNA6Q15825 494 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 SLC15A2Q16348 729 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 FAM182AQ5T1J6 154 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 NEPROQ6NW34 567 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 SCYL2Q6P3W7 929 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 SSX9Q7RTT3 188 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 SCD5Q86SK9 330 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 DHDDSQ86SQ9 333 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 TBC1D10CQ8IV04 446 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 MNS1Q8NEH6 495 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 OR2L3Q8NG85 312 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 OR4F17Q8NGA8 305 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 OR1K1Q8NGR3 316 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 OR4F5Q8NH21 305 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 RPLP0P6Q8NHW5 317 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 GLYATL2Q8WU03 294 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 TM4SF19Q96DZ7 209 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 ATXN7L3BQ96GX2 97 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 IFT74Q96LB3 600 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 SLC38A2Q96QD8 506 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 MTMR9Q96QG7 549 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 OR4F4Q96R69 305 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 GAL3ST1Q99999 423 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 GPR174Q9BXC1 333 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 NARFLQ9H6Q4 476 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 GNB4Q9HAV0 340 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 KLK11Q9UBX7 282 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 CIDEBQ9UHD4 219 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 LNPEPQ9UIQ6 1025 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 ZNF221Q9UK13 617 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 IKZF2Q9UKS7 526 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 MEMO1Q9Y316 297 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 GMPPBQ9Y5P6 360 aa2.95□□□□□ -1.94
SPG11-218ENST00000559754 RPAP1Q9BWH6 1393 aaPredicted RBP2.95□□□□□ -1.94
SPG11-218ENST00000559754 IGHV4-30-2A0A087WSY4 118 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 TRBV11-1A0A0K0K1C0 115 aa2.94□□□□□ -1.94
SPG11-218ENST00000559754 SMCO3A2RU48 225 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms