RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 QPRTQ15274 297 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 BCL2A1Q16548 175 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 LIN52Q52LA3 116 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 HACD2Q6Y1H2 254 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 SLC15A3Q8IY34 581 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 PM20D2Q8IYS1 436 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 MARVELD2Q8N4S9 558 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 FITM2Q8N6M3 262 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 RNF145Q96MT1 663 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 IFT52Q9Y366 437 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 FAM215AQ9Y5M1 114 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 FIGNL2A6NMB9 653 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 H3BML4 177 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 PEPDP12955 493 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 GABRA1P14867 456 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 ZNF708P17019 499 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 ZNF17P17021 662 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 PRKCAP17252 672 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 AQP1P29972 269 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 RYKP34925 604 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 CPA2P48052 419 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 NUDT2P50583 147 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 SUCLG1P53597 346 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 CLDN15P56746 228 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 PCBP3P57721 371 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 FOXF1Q12946 379 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 SLC25A53Q5H9E4 307 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 ZNF311Q5JNZ3 666 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 GRAMD2AQ8IUY3 354 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 FBXO27Q8NI29 283 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 CCDC120Q96HB5 630 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 HOPXQ9BPY8 73 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 SPATA9Q9BWV2 254 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 SPTAN1Q13813 2472 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 DOPEY1Q5JWR5 2465 aa18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 NCOA6Q14686 2063 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-207ENST00000559494 CCT8L1PA6NM43 557 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 KDM4EB2RXH2 506 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 H0YC42 278 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 ETV2O00321 342 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 AP3D1O14617 1153 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 TPST1O60507 370 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 NTN1O95631 604 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 HOXD4P09016 255 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 PGCP20142 388 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 POU3F2P20265 443 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 IL11P20809 199 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 PCGF2P35227 344 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 EIF1P41567 113 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 TPD52P55327 224 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 SESN3P58005 492 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 ADORA2A-AS1P86434 159 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 VMACQ2NL98 169 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 C1orf185Q5T7R7 199 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 RNF220Q5VTB9 566 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 KRT73Q86Y46 540 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 BCAS4Q8TDM0 211 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 TUBA1CQ9BQE3 449 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 GMPR2Q9P2T1 348 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 TAGLN3Q9UI15 199 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 ANGPT4Q9Y264 503 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 AP4B1Q9Y6B7 739 aa18.3■□□□□ 0.52
TSPAN3-207ENST00000559494 ARHGAP21Q5T5U3 1957 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 M0QX08 132 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 NDUFAB1O14561 156 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ZG16O60844 167 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 OPN1LWP04000 364 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ADH6P28332 368 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ACAA2P42765 397 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 SLC6A8P48029 635 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 CLDN20P56880 219 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 PMPCAQ10713 525 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ZSWIM7Q19AV6 140 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ACSF3Q4G176 576 aaPredicted RBP18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 RPTNQ6XPR3 784 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 EID3Q8N140 333 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ZPLD1Q8TCW7 415 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 SSC4DQ8WTU2 575 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 PHF10Q8WUB8 498 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 REXO5Q96IC2 774 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 MRGPRX4Q96LA9 322 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ZNF607Q96SK3 696 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 TTYH2Q9BSA4 534 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 SPATA5L1Q9BVQ7 753 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 CACYBPQ9HB71 228 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ACER3Q9NUN7 267 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 KIAA1549Q9HCM3 1950 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 ICE1Q9Y2F5 2266 aa18.29■□□□□ 0.52
TSPAN3-207ENST00000559494 MFN2O95140 757 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 EPPINO95925 133 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 GLI4P10075 376 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 PRG2P13727 222 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 PRKAR1BP31321 381 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 PTGER4P35408 488 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 IDH2P48735 452 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 DLX5P56178 289 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 PER3P56645 1201 aa18.28■□□□□ 0.52
TSPAN3-207ENST00000559494 NUP107P57740 925 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms