RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ANKUB1A6NFN9 424 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 THY1P04216 161 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 SP1P08047 785 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 UQCRBP14927 111 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 PGCP20142 388 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 FUT4P22083 530 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 IDH2P48735 452 aaKnown RBP16.46■□□□□ 0.23
CLPX-203ENST00000558958 DNASE1L1P49184 302 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 COPZ1P61923 177 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 SPIBQ01892 262 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 TIGD3Q6B0B8 471 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 SLC25A25Q6KCM7 469 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 ZNF613Q6PF04 617 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 IGFL3Q6UXB1 125 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 PLCZ1Q86YW0 608 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 OFCC1Q8IZS5 231 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 CATSPER1Q8NEC5 780 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 OR2M3Q8NG83 312 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 HES7Q9BYE0 225 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 DSN1Q9H410 356 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 A0A0B4J2E0 115 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 A0A1B0GWA3 101 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 A0A1B0GX12 115 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 GNB5O14775 395 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 NME2P1O60361 137 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 NUDT14O95848 222 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 ITGB2P05107 769 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 H1F0P07305 194 aaKnown RBP16.45■□□□□ 0.22
CLPX-203ENST00000558958 CD46P15529 392 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 NME2P22392 152 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 MST1P26927 711 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 IFNA8P32881 189 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 MASP1P48740 699 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 HMGA2P52926 109 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 CDH12P55289 794 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 GPR85P60893 370 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 TOMM34Q15785 309 aaPredicted RBP16.45■□□□□ 0.22
CLPX-203ENST00000558958 COLEC12Q5KU26 742 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 WBP2NLQ6ICG8 309 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 GDF7Q7Z4P5 450 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 CADM2Q8N3J6 435 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 OR1J4Q8NGS1 313 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 TM9SF4Q92544 642 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 EXTL1Q92935 676 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 SCMH1Q96GD3 660 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 SLC41A3Q96GZ6 507 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 C5orf34Q96MH7 638 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 FAM173AQ9BQD7 235 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 REEP1Q9H902 201 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 KLHL1Q9NR64 748 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 MAN2C1Q9NTJ4 1040 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 FBXL2Q9UKC9 423 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 KLF13Q9Y2Y9 288 aaPredicted RBP16.45■□□□□ 0.22
CLPX-203ENST00000558958 SAMHD1Q9Y3Z3 626 aaKnown RBP16.45■□□□□ 0.22
CLPX-203ENST00000558958 CSAG2Q9Y5P2 127 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 LYVE1Q9Y5Y7 322 aa16.45■□□□□ 0.22
CLPX-203ENST00000558958 A0A1W2PRQ8 180 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 MKRN2OSH3BPM6 223 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 GADD45GO95257 159 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 LYPD3O95274 346 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 THRBP10828 461 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 ELAVL4P26378 380 aaKnown RBP16.44■□□□□ 0.22
CLPX-203ENST00000558958 LIMS1P48059 325 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 IST1P53990 364 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 SESN3P58005 492 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 SMIM11AP58511 58 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 ST3GAL3Q11203 375 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 FOXO1Q12778 655 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 PPP1R8Q12972 351 aaKnown RBP16.44■□□□□ 0.22
CLPX-203ENST00000558958 DGCR6Q14129 220 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 ZNF766Q5HY98 468 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 SULF2Q8IWU5 870 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 OR2M7Q8NG81 312 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 OR4K17Q8NGC6 315 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 OR52J3Q8NH60 311 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 ZNF563Q8TA94 476 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 ZNF597Q96LX8 424 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 GNRHR2Q96P88 292 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 EPYCQ99645 322 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 TUBA8Q9NY65 449 aaPredicted RBP16.44■□□□□ 0.22
CLPX-203ENST00000558958 RPS6KB2Q9UBS0 482 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 PCDHGB7Q9Y5F8 929 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 U3KQV3 271 aa16.44■□□□□ 0.22
CLPX-203ENST00000558958 PINLYPA6NC86 204 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 LRRC3CA6NJW4 275 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 TNFRSF11BO00300 401 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 CASQ2O14958 399 aaPredicted RBP16.43■□□□□ 0.22
CLPX-203ENST00000558958 PEX1O43933 1283 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 E2F6O75461 281 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 DNAJA1P31689 397 aaKnown RBP16.43■□□□□ 0.22
CLPX-203ENST00000558958 SLC1A3P43003 542 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 CD97P48960 835 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 KCNAB2Q13303 367 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 GK3PQ14409 553 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 TRAM2Q15035 370 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 QPRTQ15274 297 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ULK3Q6PHR2 472 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ARSKQ6UWY0 536 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 GALNTL5Q7Z4T8 443 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 TMEM179BQ7Z7N9 219 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms