RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 EBF4Q9BQW3 602 aa13.73□□□□□ -0.21
RPL28-207ENST00000558815 POLDIP3Q9BY77 421 aaKnown RBP13.73□□□□□ -0.21
RPL28-207ENST00000558815 TCF7L2Q9NQB0 619 aa13.73□□□□□ -0.21
RPL28-207ENST00000558815 SDR39U1Q9NRG7 319 aaPredicted RBP13.73□□□□□ -0.21
RPL28-207ENST00000558815 GPC6Q9Y625 555 aaPredicted RBP13.73□□□□□ -0.21
RPL28-207ENST00000558815 PDZD2O15018 2839 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 CSMD2Q7Z408 3487 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 A8MXE2 369 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 MSTNO14793 375 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 KRT75O95678 551 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 NR2F1P10589 423 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 ELK4P28324 431 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 RYKP34925 604 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 KCNJ5P48544 419 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 IDH3AP50213 366 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 POLR2JP52435 117 aaKnown RBP13.72□□□□□ -0.21
RPL28-207ENST00000558815 CTBP2P56545 445 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 SORDQ00796 357 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 SKP2Q13309 424 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 FGFBP1Q14512 234 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 TMEM176BQ3YBM2 270 aaPredicted RBP13.72□□□□□ -0.21
RPL28-207ENST00000558815 GTDC1Q4AE62 458 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 EIF3MQ7L2H7 374 aaKnown RBP13.72□□□□□ -0.21
RPL28-207ENST00000558815 ROBO4Q8WZ75 1007 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 OSTF1Q92882 214 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 ZNF524Q96C55 264 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 ZG16BQ96DA0 208 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
RPL28-207ENST00000558815 ITCHQ96J02 903 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 LAT2Q9GZY6 243 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 RMND5AQ9H871 391 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 VIPAS39Q9H9C1 493 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 POLE3Q9NRF9 147 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 SLC6A13Q9NSD5 602 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
RPL28-207ENST00000558815 PROCRQ9UNN8 238 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 CSMD1Q96PZ7 3565 aa13.72□□□□□ -0.21
RPL28-207ENST00000558815 A0A1W2PNR3 127 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 CLDN24A6NM45 220 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 A6NNC1 897 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 ADAMDEC1O15204 470 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 EFNA2O43921 213 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 BCAS1O75363 584 aaPredicted RBP13.71□□□□□ -0.21
RPL28-207ENST00000558815 CTAG2O75638 210 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 CHRM4P08173 479 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 ADH6P28332 368 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 SLC7A1P30825 629 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 CRATP43155 626 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 AQP5P55064 265 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 CARD18P57730 90 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 FAM27E3Q08E93 113 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 POU4F3Q15319 338 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 EXOC3L2Q2M3D2 409 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 SLC2A7Q6PXP3 512 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 ZNF563Q8TA94 476 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 ZFP90Q8TF47 636 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 AURKBQ96GD4 344 aaPredicted RBP13.71□□□□□ -0.21
RPL28-207ENST00000558815 REXO5Q96IC2 774 aaKnown RBP13.71□□□□□ -0.21
RPL28-207ENST00000558815 MRGPRX4Q96LA9 322 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 SRXN1Q9BYN0 137 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 CLEC4MQ9H2X3 399 aaPredicted RBP13.71□□□□□ -0.21
RPL28-207ENST00000558815 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.71□□□□□ -0.21
RPL28-207ENST00000558815 SLC35A3Q9Y2D2 325 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 EMC9Q9Y3B6 208 aa13.71□□□□□ -0.21
RPL28-207ENST00000558815 CREBBPQ92793 2442 aa13.71□□□□□ -0.22
RPL28-207ENST00000558815 TACC2O95359 2948 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 FAM234BA2RU67 622 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 SH3D21A4FU49 640 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 GJE1A6NN92 205 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 NR5A2O00482 541 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 EPXP11678 715 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 ETFAP13804 333 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 POU2F1P14859 743 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 PGCP20142 388 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 PGM1P36871 562 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 SESN3P58005 492 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 MERTKQ12866 999 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 FAM214BQ7L5A3 538 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
RPL28-207ENST00000558815 SAP130Q9H0E3 1048 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 SLC38A1Q9H2H9 487 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 C12orf49Q9H741 205 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
RPL28-207ENST00000558815 MPDZO75970 2070 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 SASH3O75995 380 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 TGDSO95455 350 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 BCHEP06276 602 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 CD79BP40259 229 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 DSTNP60981 165 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 KCNJ10P78508 379 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 ZNF239Q16600 458 aaKnown RBP13.69□□□□□ -0.22
RPL28-207ENST00000558815 C3orf33Q6P1S2 294 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 ZNF474Q6S9Z5 364 aaPredicted RBP13.69□□□□□ -0.22
RPL28-207ENST00000558815 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 MSANTD1Q6ZTZ1 278 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 LSRQ86X29 649 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms