RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 IL7RP16871 459 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 BMP5P22003 454 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 TIMP3P35625 211 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 SESN3P58005 492 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 MTPNP58546 118 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 SNTB1Q13884 538 aaKnown RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 NFYCQ13952 458 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 CHMP1BQ7LBR1 199 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 GCNT2Q8N0V5 402 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 LILRA2Q8N149 483 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 CLIP4Q8N3C7 705 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 DPP10Q8N608 796 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 OR52P1PQ8NH57 321 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 MBD3L2Q8NHZ7 208 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 NFKBIDQ8NI38 313 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 WDR60Q8WVS4 1066 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 INTS12Q96CB8 462 aaKnown RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 DNAJA3Q96EY1 480 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 TREX2Q9BQ50 279 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 CPPED1Q9BRF8 314 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 CHST2Q9Y4C5 530 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 KLF2Q9Y5W3 355 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 AP4B1Q9Y6B7 739 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 HSPB2A8KAH6 182 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 TNFSF11O14788 317 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 CXCL13O43927 109 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 DNAJA2O60884 412 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 GKN3PP0CG01 181 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 BMP2P12643 396 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 ZNF17P17021 662 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 DRD4P21917 467 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 RPS4Y1P22090 263 aaKnown RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 SFTPDP35247 375 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 EIF1AXP47813 144 aaKnown RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 SLC6A8P48029 635 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 CRISP3P54108 245 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 RAC1P63000 192 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 CBFBQ13951 182 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 HSPB2Q16082 182 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 ADRM1Q16186 407 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 SGCBQ16585 318 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 CTU2Q2VPK5 515 aaKnown RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 TMEM176BQ3YBM2 270 aaPredicted RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 GCNT6Q5T4J0 391 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 MRPL2Q5T653 305 aaKnown RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 PPP4R4Q6NUP7 873 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 ZNF836Q6ZNA1 936 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 SNX32Q86XE0 403 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 GRAMD2AQ8IUY3 354 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 POU5F2Q8N7G0 328 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 FAM71CQ8NEG0 241 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 ANKRD27Q96NW4 1050 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 CGREF1Q99674 301 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 SLC39A3Q9BRY0 314 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 PIF1Q9H611 641 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 HHATLQ9HCP6 504 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 A4GALTQ9NPC4 353 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 KCNJ16Q9NPI9 418 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 DNAJB12Q9NXW2 375 aaKnown RBP12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 SLC35A3Q9Y2D2 325 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 MED12LQ86YW9 2145 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 DSPPQ9NZW4 1301 aa12.43□□□□□ -0.42
TSPAN3-205ENST00000558745 A0A0G2JPF8 293 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 C7orf72A4D263 438 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 EVPLLA8MZ36 301 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 HNRNPCL2B2RXH8 293 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 HNRNPCL3B7ZW38 293 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 LINC01387J3KSC0 135 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 FRS3O43559 492 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 HNRNPCL1O60812 293 aaKnown RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 RCBTB2O95199 551 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 PGM3O95394 542 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 NTN1O95631 604 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 HNRNPCL4P0DMR1 293 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 TMIGD3P0DMS9 266 aaPredicted RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 ARAFP10398 606 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 GPX2P18283 190 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 CCNA2P20248 432 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 LSP1P33241 339 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 MAGEA8P43361 318 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 IDH2P48735 452 aaKnown RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 SUMO3P55854 103 aaPredicted RBP12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 GNGT1P63211 74 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 TFF3Q07654 80 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 FADDQ13158 208 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 PON3Q15166 354 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 SF3B4Q15427 424 aaKnown RBP eCLIP12.42□□□□□ -0.422e-6■■□□□ 11.7
TSPAN3-205ENST00000558745 REP15Q6BDI9 236 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 P4HA3Q7Z4N8 544 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 PEX5LQ8IYB4 626 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
TSPAN3-205ENST00000558745 ZNF563Q8TA94 476 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms