RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CENPVL1A0A0U1RR11 272 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 AGAP5A6NIR3 686 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 TOXO94900 526 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 RCBTB2O95199 551 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 PLGP00747 810 aaPredicted RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 C1QCP02747 245 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 PRKCAP17252 672 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SLC7A1P30825 629 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 RYKP34925 604 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SFTPDP35247 375 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SLC6A8P48029 635 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 CPA2P48052 419 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 ASCL1P50553 236 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SUCLG1P53597 346 aaKnown RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 EEF1A1P68104 462 aaKnown RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 KCNJ10P78508 379 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SELENBP1Q13228 472 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 LARS2Q15031 903 aaKnown RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 PON3Q15166 354 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 RGNQ15493 299 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 MAPRE2Q15555 327 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 MAPK14Q16539 360 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 LIN52Q52LA3 116 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 GCNT6Q5T4J0 391 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 EEF1A1P5Q5VTE0 462 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 HBMQ6B0K9 141 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 MEX3BQ6ZN04 569 aaKnown RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 ESPNLQ6ZVH7 1005 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 ADGRE4PQ86SQ3 457 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 GCNT2Q8N0V5 402 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 LILRA2Q8N149 483 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 METTL25Q8N6Q8 603 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 NAXEQ8NCW5 288 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 ATP6V1C2Q8NEY4 427 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 ARSGQ96EG1 525 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 TMEM19Q96HH6 336 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 KLHL15Q96M94 604 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 TREX2Q9BQ50 279 aaPredicted RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 QRSL1Q9H0R6 528 aaKnown RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 SLC38A1Q9H2H9 487 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SLC24A3Q9HC58 644 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SERINC1Q9NRX5 453 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 KLHL14Q9P2G3 628 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 KCNE5Q9UJ90 142 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 ZNF232Q9UNY5 417 aa10.9□□□□□ -0.66
SRP54-206ENST00000555317 SPIN1Q9Y657 262 aaPredicted RBP10.9□□□□□ -0.66
SRP54-206ENST00000555317 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 A0A0G2JPF8 293 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 PRAMEF27A3QJZ7 478 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 HNRNPCL2B2RXH8 293 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 HNRNPCL3B7ZW38 293 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 H0YC42 278 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 C19orf84I3L1E1 186 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 TNFSF11O14788 317 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 HNRNPCL1O60812 293 aaKnown RBP10.89□□□□□ -0.67
SRP54-206ENST00000555317 IL18BPO95998 194 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 OPN1LWP04000 364 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 HNRNPCL4P0DMR1 293 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 NID1P14543 1247 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 UQCRC1P31930 480 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 PGM1P36871 562 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 AGFG1P52594 562 aaKnown RBP10.89□□□□□ -0.67
SRP54-206ENST00000555317 ZNF136P52737 540 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 MVDP53602 400 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 TPD52P55327 224 aaPredicted RBP10.89□□□□□ -0.67
SRP54-206ENST00000555317 MERTKQ12866 999 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 NFYCQ13952 458 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 TOMM34Q15785 309 aaPredicted RBP10.89□□□□□ -0.67
SRP54-206ENST00000555317 ZSWIM7Q19AV6 140 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 MMEL1Q495T6 779 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 PAGE3Q5JUK9 113 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 C3orf33Q6P1S2 294 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 POMZP3Q6PJE2 187 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 PLXDC2Q6UX71 529 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 GGNQ86UU5 652 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 LIX1LQ8IVB5 337 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 MCEMP1Q8IX19 187 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 ZNF440Q8IYI8 595 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 CNEP1R1Q8N9A8 125 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 OR52P1PQ8NH57 321 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 OR10D3Q8NH80 312 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 BBS10Q8TAM1 723 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 FNDC9Q8TBE3 224 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 POC1BQ8TC44 478 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 TSPEARQ8WU66 669 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 SLC38A5Q8WUX1 472 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 ZG16BQ96DA0 208 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 NSRP1Q9H0G5 558 aaKnown RBP10.89□□□□□ -0.67
SRP54-206ENST00000555317 ZNF385DQ9H6B1 395 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 A4GALTQ9NPC4 353 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 EXOSC3Q9NQT5 275 aaKnown RBP10.89□□□□□ -0.67
SRP54-206ENST00000555317 VAPAQ9P0L0 249 aa10.89□□□□□ -0.67
SRP54-206ENST00000555317 LRBAP50851 2863 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 APCP25054 2843 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 TGM6O95932 706 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 CRHP06850 196 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 TFPTP0C1Z6 253 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms