RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LRRC30A6NM36 301 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 F2P00734 622 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 MT-ND4P03905 459 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 NUDT7P0C024 238 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 EXOSC7Q15024 291 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 C18orf21Q32NC0 220 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 NLRC3Q7RTR2 1065 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PACRGLQ8N7B6 248 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 C2CD4AQ8NCU7 369 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SECTM1Q8WVN6 248 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 INTS14Q96SY0 518 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CACNG6Q9BXT2 260 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 OBP2AQ9NY56 170 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 GPR137BO60478 399 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 BCAS2O75934 225 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 KCNK5O95279 499 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 BIDP55957 195 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 UGT3A2Q3SY77 523 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 COQ10AQ96MF6 247 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SGPP1Q9BX95 441 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SMOXQ9NWM0 555 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TSPAN11A1L157 253 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 SNAP29O95721 258 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 EBLN1P0CF75 366 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 AKAIN1P0CW23 69 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 CSF2RAP15509 400 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF182P17025 639 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 RAB11AP62491 216 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 HACD4Q5VWC8 232 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ANKRD54Q6NXT1 300 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 GCNT2Q8N0V5 402 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 HUS1BQ8NHY5 278 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 PLEKHO2Q8TD55 490 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 NECTIN4Q96NY8 510 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TRAPPC13A5PLN9 417 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 PRSS3P35030 304 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 CCL11P51671 97 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 MGAT3Q09327 533 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TMEM176BQ3YBM2 270 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 OR1M1Q8NGA1 313 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ADAMTS18Q8TE60 1221 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 XRCC3O43542 346 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 DOK2O60496 412 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ARSBP15848 533 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 HTR5AP47898 357 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 GABREP78334 506 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 BATF2Q8N1L9 274 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 UBAC2Q8NBM4 344 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ELMOD3Q96FG2 381 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 SLC25A31Q9H0C2 315 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ABCG5Q9H222 651 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ERVMER34-1Q9H9K5 563 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 LMAN1LQ9HAT1 526 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 DUSP13Q9UII6 198 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 EMC9Q9Y3B6 208 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 A3GALT2U3KPV4 340 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 MSTNO14793 375 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 PPP1R11O60927 126 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF217O75362 1048 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 GJB5O95377 273 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 IGHG1P01857 330 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 EDDM3BP56851 147 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 FLI1Q01543 452 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 SLC35G3Q8N808 338 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 HPSE2Q8WWQ2 592 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ACTRT3Q9BYD9 372 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TXNL4BQ9NX01 149 aaKnown RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 VNN1O95497 513 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 M6PRP20645 277 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 PRMT2P55345 433 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ARHGAP11BQ3KRB8 267 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 OSTM1Q86WC4 334 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TMEM130Q8N3G9 435 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TIMD4Q96H15 378 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ZDHHC7Q9NXF8 308 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 PTPRMP28827 1452 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 NTSR1P30989 418 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ATP1B3P54709 279 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 IER5LQ5T953 404 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 MKXQ8IYA7 352 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ZDHHC14Q8IZN3 488 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 XPNPEP1Q9NQW7 623 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 TM7SF3Q9NS93 570 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 WDR37Q9Y2I8 494 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 FAM96BQ9Y3D0 163 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 K7EQM0 130 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 RAB3BP20337 219 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF169Q14929 603 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ADGRF3Q8IZF5 1079 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ACBD7Q8N6N7 88 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 MFRPQ9BY79 579 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 SSUH2Q9Y2M2 353 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 OARD1Q9Y530 152 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 GABRR3A8MPY1 467 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF587BE7ETH6 402 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 HSD17B6O14756 317 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 CSF1P09603 554 aa6.48□□□□□ -1.37
SYNE2-216ENST00000555002 ARSFP54793 590 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms