RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SIGLEC11Q96RL6 698 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PKP2Q99959 881 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 P2RY13Q9BPV8 354 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HSD17B14Q9BPX1 270 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MACROD1Q9BQ69 325 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TTYH2Q9BSA4 534 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM121Q9BTD3 319 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C1orf43Q9BWL3 253 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 UGT2B28Q9BY64 529 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 POLDIP3Q9BY77 421 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MAGEB5Q9BZ81 275 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TM6SF2Q9BZW4 377 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PCBD2Q9H0N5 130 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 CSTL1Q9H114 145 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SDCBP2Q9H190 292 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 KIR3DX1Q9H7L2 352 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 NOL11Q9H8H0 719 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 GPR35Q9HC97 309 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 KRCC1Q9NPI7 259 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SIRT7Q9NRC8 400 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF701Q9NV72 531 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PAK1IP1Q9NWT1 392 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ELOVL5Q9NYP7 299 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 RDH8Q9NYR8 311 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 COL20A1Q9P218 1284 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C5AR2Q9P296 337 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 METTL1Q9UBP6 276 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PCYOX1Q9UHG3 505 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C3orf18Q9UK00 162 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 UTS2RQ9UKP6 389 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 FBXO5Q9UKT4 447 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ZDHHC8Q9ULC8 765 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PLA2G4CQ9UP65 541 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 POFUT2Q9Y2G5 429 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PEX16Q9Y5Y5 336 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 U3KQ87 197 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 WDFY3Q8IZQ1 3526 aa4.09□□□□□ -1.76
ATXN3-227ENST00000554491 SPAG17Q6Q759 2223 aa4.09□□□□□ -1.76
ATXN3-227ENST00000554491 USP9XQ93008 2570 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 RPS10-NUDT3A0A1W2PQS6 291 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 TRBC2A0A5B9 178 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SLC22A23A1A5C7 686 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 C5orf52A6NGY3 159 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 DUXAA6NLW8 204 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 A8MXK9 166 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SUPT3HB4E1H0 165 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 NPIPA7E9PJI5 369 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MKRN2OSH3BPM6 223 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SIGLEC5O15389 551 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CFLARO15519 480 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 RGS10O43665 173 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR10H3O60404 316 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SELENOFO60613 162 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 LRP3O75074 770 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 GGCTO75223 188 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SEC14L2O76054 403 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 NXPH3O95157 252 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 VNN2O95498 520 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ACSL3O95573 720 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CPNE6O95741 557 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 NDUFB10O96000 172 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FTH1P02794 183 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MT-ND2P03891 347 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 DCNP07585 359 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SPARCP09486 303 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ATXN1LP0C7T5 689 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SLC35E2BP0CK96 405 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SLC35E2P0CK97 266 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 NPIPA8P0DM63 369 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CSH1P0DML2 217 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CSH2P0DML3 217 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ADORA3P0DMS8 318 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MYL2P10916 166 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CCL2P13500 99 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 HLA-EP13747 358 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FOLR2P14207 255 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 NQO2P16083 231 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF25P17030 456 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ATP6V1B2P21281 511 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CNR1P21554 472 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ME2P23368 584 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 AKAP5P24588 427 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 DDTP30046 118 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 NAA10P41227 235 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CCR6P51684 374 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 XKP51811 444 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PRKXP51817 358 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 DGKEP52429 567 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 KCNK10P57789 538 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 RAB5BP61020 215 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 RAP1AP62834 184 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 GTF2BQ00403 316 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FKBP3Q00688 224 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SPIBQ01892 262 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SPOCK1Q08629 439 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CNTN1Q12860 1018 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 EPS8Q12929 822 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms