RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 NPIPA8P0DM63 369 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 UBL4AP11441 157 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 UQCRBP14927 111 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 CPN1P15169 458 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF17P17021 662 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 MDH1P40925 334 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZFP36L2P47974 494 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 CRISP3P54108 245 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 GAS1P54826 345 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 DSTNP60981 165 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 EEF1A1P68104 462 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 GUCY1A3Q02108 690 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 CBFBQ13951 182 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 BCL2A1Q16548 175 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 SGCBQ16585 318 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 MMEL1Q495T6 779 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PDZK1Q5T2W1 519 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 RIPPLY2Q5TAB7 128 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 EEF1A1P5Q5VTE0 462 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 POMZP3Q6PJE2 187 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 LRRC74BQ6ZQY2 392 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 CHERPQ8IWX8 916 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PEX5LQ8IYB4 626 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 UBQLNLQ8IYU4 475 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF619Q8N2I2 560 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 OR9I1Q8NGQ6 314 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF563Q8TA94 476 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PNPT1Q8TCS8 783 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZPLD1Q8TCW7 415 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ZFP90Q8TF47 636 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 RNF138Q8WVD3 245 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ITLN2Q8WWU7 325 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 SMPDL3BQ92485 455 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PMM1Q92871 262 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 RAB8BQ92930 207 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 TRNT1Q96Q11 434 aaKnown RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 TTYH2Q9BSA4 534 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 ASPNQ9BXN1 380 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PRRG4Q9BZD6 226 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PRDM14Q9GZV8 571 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 TPT1P8Q9HAU6 139 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 KCNJ16Q9NPI9 418 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 FGFR1OP2Q9NVK5 253 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 FBXO34Q9NWN3 711 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 PAQR5Q9NXK6 330 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 LEF1Q9UJU2 399 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 MKLN1Q9UL63 735 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 NDUFAF1Q9Y375 327 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 KLF2Q9Y5W3 355 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-209ENST00000553855 AP4B1Q9Y6B7 739 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 KCNE3Q9Y6H6 103 aa7.55□□□□□ -1.2
PSEN1-209ENST00000553855 A0A1W2PP18 115 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 OR2M5A3KFT3 312 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SERINC4A6NH21 518 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 CLIC1O00299 241 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 HMGN4O00479 90 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 DYNC1I1O14576 645 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SEC14L5O43304 696 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 KIAA0513O60268 411 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 EPPINO95925 133 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 GUSBP08236 651 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 GLI4P10075 376 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 IL7RP16871 459 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 PGCP20142 388 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 RAB6AP20340 208 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 HTR1EP28566 365 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 CDKN2CP42773 168 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SLC6A8P48029 635 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 GFRA1P56159 465 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 NUP107P57740 925 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ADORA2A-AS1P86434 159 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 FADDQ13158 208 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 LARS2Q15031 903 aaKnown RBP7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF141Q15928 474 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ZSWIM7Q19AV6 140 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ACSF3Q4G176 576 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-209ENST00000553855 KLHL26Q53HC5 615 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
PSEN1-209ENST00000553855 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SLC2A7Q6PXP3 512 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 APOOLQ6UXV4 268 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 KRT73Q86Y46 540 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 GRAMD2AQ8IUY3 354 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 OR5W2Q8NH69 310 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 TSPEARQ8WU66 669 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 TMEM234Q8WY98 164 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 NTNG2Q96CW9 530 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 WDYHV1Q96HA8 205 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ZFP3Q96NJ6 502 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF350Q9GZX5 532 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms