RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PTGES2Q9H7Z7 377 aa16.37■□□□□ 0.21
PSEN1-208ENST00000553719 PLSCR2Q9NRY7 297 aa16.37■□□□□ 0.21
PSEN1-208ENST00000553719 MED17Q9NVC6 651 aa16.37■□□□□ 0.21
PSEN1-208ENST00000553719 KLHL28Q9NXS3 571 aa16.37■□□□□ 0.21
PSEN1-208ENST00000553719 B4GALT7Q9UBV7 327 aa16.37■□□□□ 0.21
PSEN1-208ENST00000553719 TESQ9UGI8 421 aaKnown RBP16.37■□□□□ 0.21
PSEN1-208ENST00000553719 PRDM4Q9UKN5 801 aa16.37■□□□□ 0.21
PSEN1-208ENST00000553719 A0A087WZY1 265 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 ERICH4A6NGS2 130 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 ACOT7O00154 380 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 FMO6PO60774 539 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 IGHG3P01860 377 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 PSMA4P25789 261 aaKnown RBP16.36■□□□□ 0.21
PSEN1-208ENST00000553719 DPP4P27487 766 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 GDF1P27539 372 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 RGS8P57771 180 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-208ENST00000553719 B3GALT5-AS1P59052 145 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 HOXC5Q00444 222 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 PLGLB1Q02325 96 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 IFI44LQ53G44 452 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 TSPYL5Q86VY4 417 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-208ENST00000553719 CARM1Q86X55 608 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 TMCO5AQ8N6Q1 288 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 LSMEM1Q8N8F7 131 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-208ENST00000553719 POC1BQ8TC44 478 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 GEMIN6Q8WXD5 167 aaKnown RBP16.36■□□□□ 0.21
PSEN1-208ENST00000553719 TPD52L3Q96J77 140 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 C7orf34Q96L11 122 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 NPAS1Q99742 590 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 ACKR4Q9NPB9 350 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 ANAPC2Q9UJX6 822 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 SH3GLB1Q9Y371 365 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 FREM3P0C091 2139 aa16.36■□□□□ 0.21
PSEN1-208ENST00000553719 TCRBV3S1A0A5B6 114 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 GMFGO60234 142 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 CYP7B1O75881 506 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 WISP2O76076 250 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 CRYABP02511 175 aaKnown RBP16.35■□□□□ 0.21
PSEN1-208ENST00000553719 NQO1P15559 274 aaKnown RBP16.35■□□□□ 0.21
PSEN1-208ENST00000553719 PRKCAP17252 672 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 PGCP20142 388 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 CCR4P51679 360 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 TDGF1P3P51864 188 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 KCNC4Q03721 635 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 QPRTQ15274 297 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 GLYR1Q49A26 553 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-208ENST00000553719 PRR30Q53SZ7 412 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-208ENST00000553719 ST8SIA1Q92185 356 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 SNRNP40Q96DI7 357 aaKnown RBP16.35■□□□□ 0.21
PSEN1-208ENST00000553719 PYURFQ96I23 114 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 SLX1AQ9BQ83 275 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 TRIM15Q9C019 465 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 TAS2R10Q9NYW0 307 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 SLC9A8Q9Y2E8 581 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 LIPGQ9Y5X9 500 aa16.35■□□□□ 0.21
PSEN1-208ENST00000553719 ZNF407Q9C0G0 2248 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 TFECO14948 347 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 CDC40O60508 579 aaKnown RBP eCLIP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 RYKP34925 604 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 MAGEA2P43356 314 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 OR1E2P47887 323 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 GFRA1P56159 465 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 FOXK1P85037 733 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 ALDH6A1Q02252 535 aaKnown RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 CCNIQ14094 377 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 FAM180AQ6UWF9 173 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 ADGRG5Q8IZF4 528 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 GTPBP8Q8N3Z3 284 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 CISD2Q8N5K1 135 aaKnown RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 VANGL1Q8TAA9 524 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 FAR1Q8WVX9 515 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 NR4A3Q92570 626 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 POP5Q969H6 163 aaKnown RBP16.34■□□□□ 0.21
PSEN1-208ENST00000553719 ZBTB8AQ96BR9 441 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 DTNBP1Q96EV8 351 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 PRR14Q9BWN1 585 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 AMBRA1Q9C0C7 1298 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 ACER3Q9NUN7 267 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 DKKL1Q9UK85 242 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 SLC13A4Q9UKG4 626 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 VDAC3Q9Y277 283 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 FAM208BQ5VWN6 2430 aa16.34■□□□□ 0.21
PSEN1-208ENST00000553719 ZNF17P17021 662 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 HK1P19367 917 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 IDH2P48735 452 aaKnown RBP16.33■□□□□ 0.2
PSEN1-208ENST00000553719 ZNF41P51814 821 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-208ENST00000553719 SESN3P58005 492 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 ACTR3P61158 418 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 VLDLRP98155 873 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 FOXF1Q12946 379 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 NFATC3Q12968 1075 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 C1orf146Q5VVC0 180 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 RANBP3LQ86VV4 465 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-208ENST00000553719 C3orf49Q96BT1 292 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 MRGPRX4Q96LA9 322 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 LRGUKQ96M69 825 aa16.33■□□□□ 0.2
PSEN1-208ENST00000553719 RAB3IPQ96QF0 476 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms