RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GABRA1P14867 456 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 ADH6P28332 368 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 CA7P43166 264 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 GFRA1P56159 465 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 B3GALT5-AS1P59052 145 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 NCALDP61601 193 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 COPZ1P61923 177 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 KCNC4Q03721 635 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 FOXF1Q12946 379 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 C3AR1Q16581 482 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 GXYLT1Q4G148 440 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 DHRS4L2Q6PKH6 230 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 CHMP1BQ7LBR1 199 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 GRAMD2AQ8IUY3 354 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 SMPDL3BQ92485 455 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 RNF145Q96MT1 663 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 TIMP4Q99727 224 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 PINK1Q9BXM7 581 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 PNPLA3Q9NST1 481 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 ABCD2Q9UBJ2 740 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 AP4B1Q9Y6B7 739 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 CCL21O00585 134 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 MFN2O95140 757 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 OPN1SWP03999 348 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 PRKCAP17252 672 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 ELK4P28324 431 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 PTGER4P35408 488 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 IDH2P48735 452 aaKnown RBP12.52□□□□□ -0.41
TUBB3-202ENST00000553656 GSK3BP49841 420 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 PER3P56645 1201 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SESN3P58005 492 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SRYQ05066 204 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 BCL2A1Q16548 175 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 TMEM44Q2T9K0 475 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.41
TUBB3-202ENST00000553656 C4orf17Q53FE4 359 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SAMD4BQ5PRF9 694 aaKnown RBP12.52□□□□□ -0.41
TUBB3-202ENST00000553656 MTFR2Q6P444 385 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 CCDC80Q76M96 950 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 UBQLNLQ8IYU4 475 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 CLIP4Q8N3C7 705 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SMYD1Q8NB12 490 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 FBXO27Q8NI29 283 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 FIG4Q92562 907 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 EVA1AQ9H8M9 152 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SERINC1Q9NRX5 453 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 ACER3Q9NUN7 267 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 TMEM181Q9P2C4 612 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 SLC5A6Q9Y289 635 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF337Q9Y3M9 751 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF407Q9C0G0 2248 aa12.52□□□□□ -0.41
TUBB3-202ENST00000553656 NBASA2RRP1 2371 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 RP1L1Q8IWN7 2480 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-202ENST00000553656 GJE1A6NN92 205 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 AHRRA9YTQ3 701 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 AP3D1O14617 1153 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 SEC14L5O43304 696 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 UBOX5O94941 541 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 HOXD4P09016 255 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-202ENST00000553656 GKN3PP0CG01 181 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 CPN1P15169 458 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 ACVR2AP27037 513 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 HTR3AP46098 478 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 STARP49675 285 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 LHX2P50458 406 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-202ENST00000553656 PLAURQ03405 335 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 DMTNQ08495 405 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 MERTKQ12866 999 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 EPS8Q12929 822 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 SELENBP1Q13228 472 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-202ENST00000553656 DCST1Q5T197 706 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 C3P1Q6ZMU1 363 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 GRINAQ7Z429 371 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 FJX1Q86VR8 437 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 ZGRF1Q86YA3 2104 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 CADM2Q8N3J6 435 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 PROX1Q92786 737 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 KLHDC3Q9BQ90 382 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 BAG5Q9UL15 447 aa12.51□□□□□ -0.41
TUBB3-202ENST00000553656 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-202ENST00000553656 ESPL1Q14674 2120 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 E9PLN8 166 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 SYT5O00445 386 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 FAAHO00519 579 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 CXCR6O00574 342 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms