RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
VDR-208ENST00000550325 CCDC116Q8IYX3 515 aa11.28□□□□□ -0.6
VDR-208ENST00000550325 MCHR1Q99705 422 aa11.28□□□□□ -0.6
VDR-208ENST00000550325 ZNF471Q9BX82 626 aaPredicted RBP11.28□□□□□ -0.6
VDR-208ENST00000550325 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
VDR-208ENST00000550325 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
VDR-208ENST00000550325 SLC6A5Q9Y345 797 aa11.28□□□□□ -0.6
VDR-208ENST00000550325 PRAF2O60831 178 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 KCNJ3P48549 501 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 AP3S2P59780 193 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 LMAN2Q12907 356 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 SLC25A30Q5SVS4 291 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 C9orf64Q5T6V5 341 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 DNAJB7Q7Z6W7 309 aaPredicted RBP11.27□□□□□ -0.6
VDR-208ENST00000550325 CDH26Q8IXH8 852 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 LINC00471Q8N535 108 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 COL26A1Q96A83 441 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.6
VDR-208ENST00000550325 SYNPO2LQ9H987 977 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 KLHL9Q9P2J3 617 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 CA5BQ9Y2D0 317 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 KCNE3Q9Y6H6 103 aa11.27□□□□□ -0.6
VDR-208ENST00000550325 SPTBP11277 2137 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 LINC00587B1AMM8 73 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 F5H5P2 479 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 PLPP1O14494 284 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 APOC1P02654 83 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 CKMP06732 381 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 RD3LP0DJH9 198 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 MAT2AP31153 395 aaKnown RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 MEOX2P50222 304 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 HACD4Q5VWC8 232 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 NXPE4Q6UWF7 544 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 ARL14Q8N4G2 192 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 OR56A3Q8NH54 315 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 OR51A7Q8NH64 312 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 SMIM4Q8WVI0 70 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 PDCD1LG2Q9BQ51 273 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 ASF1BQ9NVP2 202 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 KLHL28Q9NXS3 571 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 ASF1AQ9Y294 204 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 PCDHGA5Q9Y5G8 931 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 PPM1DO15297 605 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 SOCS5O75159 536 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 RASGRP1O95267 797 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 TGM6O95932 706 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 HMGN2P05204 90 aaKnown RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 S100A9P06702 114 aaKnown RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 IFNGR1P15260 489 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 TRHRP34981 398 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 SERTAD2Q14140 314 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 C2orf68Q2NKX9 166 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 GLDNQ6ZMI3 551 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 TMED4Q7Z7H5 227 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 TMEM17Q86X19 198 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 LRRC56Q8IYG6 542 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 RASGEF1AQ8N9B8 481 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 CPNE2Q96FN4 548 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 ESRP2Q9H6T0 727 aaKnown RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 AKAP7Q9P0M2 348 aaPredicted RBP11.27□□□□□ -0.61
VDR-208ENST00000550325 TAC3Q9UHF0 121 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 FBXL4Q9UKA2 621 aa11.27□□□□□ -0.61
VDR-208ENST00000550325 ACOD1A6NK06 481 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 FAM25EA8MYX2 175 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 ECDO95905 644 aaPredicted RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 HMGN1P05114 100 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 EPXP11678 715 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 MAPK8P45983 427 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 ANXA11P50995 505 aaKnown RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 HSD17B13Q7Z5P4 300 aaPredicted RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 SLC22A8Q8TCC7 542 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 NSMAFQ92636 917 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 UBQLN3Q9H347 655 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 SYNDIG1Q9H7V2 258 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 CAPN10Q9HC96 672 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 ARID1AO14497 2285 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 A0A1B0GUH1 482 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 OR2W5A6NFC9 320 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 PYCARD-AS1I3L0S3 204 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 CDC123O75794 336 aaPredicted RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 VNN2O95498 520 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 HIST1H2ABP04908 130 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 ATP1B1P05026 303 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 FAM69AQ5T7M9 428 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 ZNF660Q6AZW8 331 aaPredicted RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 FUT10Q6P4F1 479 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 MEPCEQ7L2J0 689 aaKnown RBP11.26□□□□□ -0.61
VDR-208ENST00000550325 HIST3H2AQ7L7L0 130 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 OR6V1Q8N148 313 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 BRI3BPQ8WY22 251 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 HIST1H2ACQ93077 130 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 TCEAL4Q96EI5 215 aa11.26□□□□□ -0.61
VDR-208ENST00000550325 CAPNS2Q96L46 248 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms