RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 A0A1W2PNR3 127 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 FAM234BA2RU67 622 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 A8MXE2 369 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 H3BNH8 94 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 LINC01387J3KSC0 135 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 AP3D1O14617 1153 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 POLR3GO15318 223 aaPredicted RBP8.76□□□□□ -1.01
HDAC7-229ENST00000549883 DNAJA2O60884 412 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 AK1P00568 194 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 CSTAP01040 98 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 CGAP01215 116 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 NID1P14543 1247 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 CAPN3P20807 821 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 RYKP34925 604 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 SESN3P58005 492 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 FAM27E3Q08E93 113 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 SGCBQ16585 318 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 TMEM176BQ3YBM2 270 aaPredicted RBP8.76□□□□□ -1.01
HDAC7-229ENST00000549883 PAGE3Q5JUK9 113 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 ATAD3BQ5T9A4 648 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 AP1ARQ63HQ0 302 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 HBMQ6B0K9 141 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 C22orf34Q6ZV56 151 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF610Q8N9Z0 462 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 FAM71CQ8NEG0 241 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 OR5W2Q8NH69 310 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 OR2V1Q8NHB1 315 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 GTF2H4Q92759 462 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 OSTF1Q92882 214 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 KLHL15Q96M94 604 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 ZFP3Q96NJ6 502 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 GPATCH1Q9BRR8 931 aaKnown RBP8.76□□□□□ -1.01
HDAC7-229ENST00000549883 RSPO3Q9BXY4 272 aaPredicted RBP8.76□□□□□ -1.01
HDAC7-229ENST00000549883 LAT2Q9GZY6 243 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 PAIP1Q9H074 479 aaKnown RBP8.76□□□□□ -1.01
HDAC7-229ENST00000549883 TPT1P8Q9HAU6 139 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 ARGLU1Q9NWB6 273 aaPredicted RBP8.76□□□□□ -1.01
HDAC7-229ENST00000549883 KCNN3Q9UGI6 736 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 PACSIN3Q9UKS6 424 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF175Q9Y473 711 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 PCDHB14Q9Y5E9 798 aa8.76□□□□□ -1.01
HDAC7-229ENST00000549883 IGHV3-15A0A0B4J1V0 119 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 NR5A2O00482 541 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 EIF4E2O60573 245 aaKnown RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CTAG2O75638 210 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 SOX30O94993 753 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 TGDSO95455 350 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 ZCCHC18P0CG32 403 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 NR2F1P10589 423 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 RPS4Y1P22090 263 aaKnown RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 ENPP1P22413 925 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CCKARP32238 428 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CPOXP36551 454 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CPA2P48052 419 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 SUMO3P55854 103 aaPredicted RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 EEFSECP57772 596 aaKnown RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 RPS3AP61247 264 aaKnown RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 KCNJ10P78508 379 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 SLC25A53Q5H9E4 307 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 C6orf10Q5SRN2 563 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 BLOC1S3Q6QNY0 202 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 ESPNLQ6ZVH7 1005 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 TMEM200AQ86VY9 491 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 VRK2Q86Y07 508 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 TRIML2Q8N7C3 387 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 ABHD3Q8WU67 409 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 SLC38A5Q8WUX1 472 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 MAL2Q969L2 176 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 ITCHQ96J02 903 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 MAGEB18Q96M61 343 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 TRNT1Q96Q11 434 aaKnown RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CCDC28BQ9BUN5 200 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 IKZF5Q9H5V7 419 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 NPHS2Q9NP85 383 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 RLIMQ9NVW2 624 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CCDC167Q9P0B6 97 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 DCTN4Q9UJW0 460 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 ITGB1BP2Q9UKP3 347 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CHST2Q9Y4C5 530 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 GPC6Q9Y625 555 aaPredicted RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 HRNRQ86YZ3 2850 aaPredicted RBP8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
HDAC7-229ENST00000549883 CCDC168Q8NDH2 2452 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 A0A1W2PPR1 153 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 FAM221AA4D161 298 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 TUBAL3A6NHL2 446 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 AGAP5A6NIR3 686 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ETV2O00321 342 aaPredicted RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 SIAH2O43255 324 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 EDF1O60869 148 aaKnown RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ANP32DO95626 131 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 AGR2O95994 175 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 BCHEP06276 602 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 GUSBP08236 651 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 TFPTP0C1Z6 253 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 CCNA2P20248 432 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ME2P23368 584 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 EDNRAP25101 427 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms