RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RCBTB1Q8NDN9 531 aa17.1■□□□□ 0.33
PRPF40B-208ENST00000548436 ZNF426Q9BUY5 554 aa17.1■□□□□ 0.33
PRPF40B-208ENST00000548436 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
PRPF40B-208ENST00000548436 TIGARQ9NQ88 270 aa17.1■□□□□ 0.33
PRPF40B-208ENST00000548436 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 SHISA3A0PJX4 238 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 IGLV3-21P80748 117 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 SELENBP1Q13228 472 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 GAS6Q14393 721 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 ZNF267Q14586 743 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 KLHL12Q53G59 568 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 ATP6V1C2Q8NEY4 427 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 TXNDC15Q96J42 360 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 TBX5Q99593 518 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 PRTFDC1Q9NRG1 225 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 INIPQ9NRY2 104 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 FAM86C2PA6NEL3 165 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 CCDC182A6NF36 153 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 CASKO14936 926 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 REM1O75628 298 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 SOX30O94993 753 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 APOA1P02647 267 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 HLA-DPB1P04440 258 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 IL9P15248 144 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 NOS3P29474 1203 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 NUDT1P36639 197 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 CAPZBP47756 277 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 FASLGP48023 281 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 FHL1Q13642 323 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 NNATQ16517 81 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 FAM131AQ6UXB0 335 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 MARCH9Q86YJ5 346 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 GATAD2AQ86YP4 633 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 METTL27Q8N6F8 245 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 DNAJA4Q8WW22 397 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 TCTN2Q96GX1 697 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 MSANTD3Q96H12 275 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 TNFRSF13CQ96RJ3 184 aa17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 SIRT4Q9Y6E7 314 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-208ENST00000548436 CD8B2A6NJW9 211 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 PRR23D1E9PI22 279 aaPredicted RBP17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 DVL2O14641 736 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 HCN1O60741 890 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 CSF2P04141 144 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 PROS1P07225 676 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 GUSBP08236 651 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 PRR23D2P0DMB1 279 aaPredicted RBP17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 CLUP10909 449 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 CD8BP10966 210 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 IL7P13232 177 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 MAOAP21397 527 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 TPTEP56180 551 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 ALG10BQ5I7T1 473 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 DDI2Q5TDH0 399 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 TMEM91Q6ZNR0 172 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 NRARPQ7Z6K4 114 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 ZNF595Q8IYB9 648 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 TSTD1Q8NFU3 115 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 TMCO6Q96DC7 493 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 DIRAS2Q96HU8 199 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 ART5Q96L15 291 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 DGAT2Q96PD7 388 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 TEAD3Q99594 435 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 ALG8Q9BVK2 526 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 EVA1AQ9H8M9 152 aa17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 TMEM184BQ9Y519 407 aaPredicted RBP17.08■□□□□ 0.33
PRPF40B-208ENST00000548436 C2orf92A0A1B0GVN3 265 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 NCR1O76036 304 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 NSA2O95478 260 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 PPP1R3DO95685 299 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 CT45A8P0DMV1 189 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 CT45A9P0DMV2 189 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 GPR3P46089 330 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 GABRA4P48169 554 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 FGFBP1Q14512 234 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 ZNF141Q15928 474 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 CT45A2Q5DJT8 189 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 OAFQ86UD1 273 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 LSMEM1Q8N8F7 131 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 IL17RDQ8NFM7 739 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 NEIL3Q8TAT5 605 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 LMX1AQ8TE12 382 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 COQ7Q99807 217 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 TRIM2Q9C040 744 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 OR51V1Q9H2C8 321 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 ASB6Q9NWX5 421 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 FBXL4Q9UKA2 621 aa17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 MRPS33Q9Y291 106 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-208ENST00000548436 FABP12A6NFH5 140 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 GAAP10253 952 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 CRMP1Q14194 572 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 ELOCQ15369 112 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 NDUFAF6Q330K2 333 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 LINC00114Q6XXX2 140 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 CYB561A3Q8NBI2 242 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 SETD6Q8TBK2 473 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 AP3S1Q92572 193 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 NEDD4LQ96PU5 975 aa17.07■□□□□ 0.32
PRPF40B-208ENST00000548436 LMAN1LQ9HAT1 526 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms