RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ARHGDIGQ99819 225 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 DUSP16Q9BY84 665 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 CHIAQ9BZP6 476 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF385DQ9H6B1 395 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 STOX2Q9P2F5 926 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 ATP6V1HQ9UI12 483 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 FOXJ3Q9UPW0 622 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 MAB21L2Q9Y586 359 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 CARMIL1Q5VZK9 1371 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 KIF26AQ9ULI4 1882 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 IGLV4-60A0A075B6I1 120 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 RNF103-CHMP3A0A140T963 221 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.17□□□□□ -2.06
CCDC38-204ENST00000546816 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.17□□□□□ -2.06
CCDC38-204ENST00000546816 FAM230AA0A1W2PPH8 454 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 PP2D1A8MPX8 630 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 HCRTR1O43613 425 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 TOM1L1O75674 476 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 UGT2B17O75795 530 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 MT-ATP6P00846 226 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 OPN1LWP04000 364 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 RNH1P13489 461 aaKnown RBP2.17□□□□□ -2.06
CCDC38-204ENST00000546816 CSNK1DP48730 415 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 NAPAP54920 295 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 SLC26A5P58743 744 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 CSTF1Q05048 431 aaKnown RBP2.17□□□□□ -2.06
CCDC38-204ENST00000546816 AP1B1Q10567 949 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 ATXN7L3Q14CW9 347 aaPredicted RBP2.17□□□□□ -2.06
CCDC38-204ENST00000546816 CASC10Q5T4H9 136 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 TSPO2Q5TGU0 170 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 LIPNQ5VXI9 398 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 UNQ9370/PRO34162Q6UXP9 181 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 LRRC31Q6UY01 552 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 ARCQ7LC44 396 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 CBWD2Q8IUF1 395 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 AENQ8WTP8 325 aaKnown RBP2.17□□□□□ -2.06
CCDC38-204ENST00000546816 FCGR1BQ92637 280 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 OR5B2Q96R09 309 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 RNF126Q9BV68 326 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 PHF11Q9UIL8 331 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 MOSPD1Q9UJG1 213 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 PLLPQ9Y342 182 aa2.17□□□□□ -2.06
CCDC38-204ENST00000546816 A0A1B0GWB2 263 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 NKX2-6A6NCS4 301 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 HELTA6NFD8 242 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF705EA8MWA4 302 aaPredicted RBP2.16□□□□□ -2.06
CCDC38-204ENST00000546816 RASGRF2O14827 1237 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 HSPA1LP34931 641 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 RGS1Q08116 209 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 MOBPQ13875 183 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 ADPRMQ3LIE5 342 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 RBM43Q6ZSC3 357 aaKnown RBP2.16□□□□□ -2.06
CCDC38-204ENST00000546816 CYS1Q717R9 158 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 CENPUQ71F23 418 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 HDDC3Q8N4P3 179 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF713Q8N859 430 aaPredicted RBP2.16□□□□□ -2.06
CCDC38-204ENST00000546816 OR2T33Q8NG76 320 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 FICDQ9BVA6 458 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 ROPN1Q9HAT0 212 aaPredicted RBP2.16□□□□□ -2.06
CCDC38-204ENST00000546816 B3GNT2Q9NY97 397 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 RDH8Q9NYR8 311 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 FETUBQ9UGM5 382 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 TP53TG5Q9Y2B4 290 aa2.16□□□□□ -2.06
CCDC38-204ENST00000546816 ANKRD30BLA7E2S9 258 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 NBR2O15453 112 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 DUX1O43812 170 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 ETS1P14921 441 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 PSMA2P25787 234 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 KIF5BP33176 963 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 CD80P33681 288 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 ST3GAL3Q11203 375 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 MADCAM1Q13477 382 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 PDK1Q15118 436 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 ZNF311Q5JNZ3 666 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 LANCL3Q6ZV70 420 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 APTXQ7Z2E3 356 aaKnown RBP2.15□□□□□ -2.07
CCDC38-204ENST00000546816 SNX32Q86XE0 403 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 OR52I1Q8NGK6 324 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 UCN3Q969E3 161 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 RNF185Q96GF1 192 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 SAMD8Q96LT4 415 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 KCNK16Q96T55 309 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 NRIP2Q9BQI9 281 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 CRNKL1Q9BZJ0 848 aaKnown RBP2.15□□□□□ -2.07
CCDC38-204ENST00000546816 RAB17Q9H0T7 212 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 MAGT1Q9H0U3 335 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 ECT2Q9H8V3 914 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 VAT1LQ9HCJ6 419 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 NUDT15Q9NV35 164 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 PAK1IP1Q9NWT1 392 aaPredicted RBP2.15□□□□□ -2.07
CCDC38-204ENST00000546816 AIPL1Q9NZN9 384 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 SPASTQ9UBP0 616 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 NEUROG3Q9Y4Z2 214 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 NCAPD2Q15021 1401 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 ABCC4O15439 1325 aa2.15□□□□□ -2.07
CCDC38-204ENST00000546816 A0A096LNJ9 63 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 SULT2B1O00204 365 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 RIPK2O43353 540 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 STMN1P16949 149 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 ARF4P18085 180 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms