RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ESPNB1AK53 854 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 PDLIM1O00151 329 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 SCDO00767 359 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 OIP5O43482 229 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
RTN3-214ENST00000545432 ITGA2P17301 1181 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 HMOX2P30519 316 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 NTF4P34130 210 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 SERPINB4P48594 390 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 PKNOX1P55347 436 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 SELENBP1Q13228 472 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 GGTLC2Q14390 218 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 KIAA0040Q15053 153 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 GABRA6Q16445 453 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 GALNT5Q7Z7M9 940 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.91□□□□□ -0.34
RTN3-214ENST00000545432 WDR31Q8NA23 367 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 SPATA4Q8NEY3 305 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 NUP43Q8NFH3 380 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 SGMS2Q8NHU3 365 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 BOD1Q96IK1 185 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 METTL2AQ96IZ6 378 aaKnown RBP12.91□□□□□ -0.34
RTN3-214ENST00000545432 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 EQTNQ9NQ60 294 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 MALT1Q9UDY8 824 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 POU2F3Q9UKI9 436 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 STK38LQ9Y2H1 464 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.345e-7■□□□□ 10.4
RTN3-214ENST00000545432 NPIPB9F8W1W9 429 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 SUPT7LO94864 414 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 ZNF83P51522 516 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 PHC1P78364 1004 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 BTKQ06187 659 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 FAM174BQ3ZCQ3 159 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 ABLIM2Q6H8Q1 611 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 OR7E24Q6IFN5 339 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 BHLHB9Q6PI77 547 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 RELL1Q8IUW5 271 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 ZNF540Q8NDQ6 660 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 ZMYND19Q96E35 227 aaPredicted RBP12.9□□□□□ -0.34
RTN3-214ENST00000545432 SORCS2Q96PQ0 1159 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 TMEM237Q96Q45 408 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
RTN3-214ENST00000545432 FKRPQ9H9S5 495 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 TAS2R16Q9NYV7 291 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 CCL27Q9Y4X3 112 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
RTN3-214ENST00000545432 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 C9JVG2 144 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 RAD51DO75771 328 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 H6PDO95479 791 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 TACSTD2P09758 323 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 HPGDP15428 266 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 GIFP27352 417 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 SERPINB9P50453 376 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 UAP1Q16222 522 aaPredicted RBP12.89□□□□□ -0.35
RTN3-214ENST00000545432 NOXRED1Q6NXP6 359 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 TMPPEQ6ZT21 453 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 ZNF100Q8IYN0 542 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 SEMA6DQ8NFY4 1073 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 OR52N5Q8NH56 324 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 HPS1Q92902 700 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 ZNF775Q96BV0 537 aaPredicted RBP12.89□□□□□ -0.35
RTN3-214ENST00000545432 L3HYPDHQ96EM0 354 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 EGLN2Q96KS0 407 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 MS4A4EQ96PG1 132 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 STACQ99469 402 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 BTBD2Q9BX70 525 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 HOXD1Q9GZZ0 328 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 ACSS1Q9NUB1 689 aaPredicted RBP12.89□□□□□ -0.35
RTN3-214ENST00000545432 ZDHHC18Q9NUE0 388 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 ZNF180Q9UJW8 692 aa12.89□□□□□ -0.35
RTN3-214ENST00000545432 UTP11Q9Y3A2 253 aaKnown RBP12.89□□□□□ -0.35
RTN3-214ENST00000545432 HEATR1Q9H583 2144 aaKnown RBP12.89□□□□□ -0.35
RTN3-214ENST00000545432 ZNF716A6NP11 495 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 KIAA0513O60268 411 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
RTN3-214ENST00000545432 VENTXO95231 258 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 ITGA5P08648 1049 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 ALOX5P09917 674 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 PRPH2P23942 346 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 SLC16A1P53985 500 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 PRKAA2P54646 552 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 HSPB3Q12988 150 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 LCP2Q13094 533 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTN3-214ENST00000545432 CCNJQ5T5M9 372 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
RTN3-214ENST00000545432 C17orf78Q8N4C9 275 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 PHOSPHO1Q8TCT1 267 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 KCNA7Q96RP8 456 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 BHLHE41Q9C0J9 482 aaPredicted RBP12.88□□□□□ -0.35
RTN3-214ENST00000545432 IQCGQ9H095 443 aaKnown RBP12.88□□□□□ -0.35
RTN3-214ENST00000545432 PIGUQ9H490 435 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 ASB6Q9NWX5 421 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms