RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FKRPQ9H9S5 495 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 CXorf21Q9HAI6 301 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 FOLH1BQ9HBA9 442 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 ZBTB26Q9HCK0 441 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 HHATLQ9HCP6 504 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 MYNNQ9NPC7 610 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 ABHD10Q9NUJ1 306 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 LYARQ9NX58 379 aaKnown RBP3.58□□□□□ -1.84
SNHG1-220ENST00000544550 ASIC3Q9UHC3 531 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 FBXO5Q9UKT4 447 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 CORO2BQ9UQ03 480 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 SNX13Q9Y5W8 968 aa3.58□□□□□ -1.84
SNHG1-220ENST00000544550 NPIPA5A0A0B4J1W7 369 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 LRP5LA4QPB2 252 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CDHR4A6H8M9 788 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OR5H1A6NKK0 313 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CCT8L1PA6NM43 557 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 MIF4GDA9UHW6 222 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 NPIPA7E9PJI5 369 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 M0QZ24 198 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RTCAO00442 366 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 LIASO43766 372 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 DNAJC13O75165 2243 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 REM1O75628 298 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 MPDZO75970 2070 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 LY6HO94772 140 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 PRSS23O95084 383 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ABCA1O95477 2261 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 STAMBPO95630 424 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CHEK2O96017 543 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 NPIPA8P0DM63 369 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF17P17021 662 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 GGT1P19440 569 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TPSB2P20231 275 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CD22P20273 847 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 NT5EP21589 574 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 DRD5P21918 477 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 GCSHP23434 173 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ZFP36P26651 326 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 GIFP27352 417 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 GCH1P30793 250 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RBMXP38159 391 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CASP2P42575 452 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 MAGEA1P43355 309 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 PPICP45877 212 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 SLC6A8P48029 635 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CLK3P49761 638 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 PNLIPRP2P54317 469 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 NAP1L1P55209 391 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 UBA52P62987 128 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 PHEXP78562 749 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RASGEF1BQ0VAM2 473 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 KIF5AQ12840 1032 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 DAG1Q14118 895 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 SPA17Q15506 151 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OASLQ15646 514 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TPSAB1Q15661 275 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TSC22D1Q15714 1073 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TBCCQ15814 346 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 NNATQ16517 81 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 PPP1R3AQ16821 1122 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ARL13AQ5H913 290 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 C1QTNF12Q5T7M4 302 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 KHDRBS2Q5VWX1 349 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 C18orf63Q68DL7 685 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OR5M10Q6IEU7 315 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CYP20A1Q6UW02 462 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RBMS3Q6XE24 437 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 GGNQ86UU5 652 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RNF152Q8N8N0 203 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 SYT14Q8NB59 555 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OR2M3Q8NG83 312 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OR4K14Q8NGD5 310 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OR10D3Q8NH80 312 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TBC1D15Q8TC07 691 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 Q8TCH9 128 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 DOK4Q8TEW6 326 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF473Q8WTR7 871 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RNF138Q8WVD3 245 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CPNE4Q96A23 557 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TMEM186Q96B77 213 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 WDR34Q96EX3 536 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CMTM7Q96FZ5 175 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 PDLIM5Q96HC4 596 aaKnown RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 SORCS2Q96PQ0 1159 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ADOQ96SZ5 270 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 MNTQ99583 582 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ITPAQ9BY32 194 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 RAB1BQ9H0U4 201 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 DSN1Q9H410 356 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TSPY26PQ9H489 355 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 TIGARQ9NQ88 270 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 SMYD2Q9NRG4 433 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 C20orf96Q9NUD7 363 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 HIF1ANQ9NWT6 349 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 EHD3Q9NZN3 535 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 KLHL13Q9P2N7 655 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 BCAP29Q9UHQ4 241 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF490Q9ULM2 529 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-220ENST00000544550 CORO1CQ9ULV4 474 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms