RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 H3BML4 177 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 CCL21O00585 134 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 TPST1O60507 370 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 NTN1O95631 604 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 EPPINO95925 133 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 CPN1P15169 458 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 PRKCAP17252 672 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 PGCP20142 388 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 IL11P20809 199 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 RYKP34925 604 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 CLDN18P56856 261 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 PSME3P61289 254 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 RTL6Q6ICC9 239 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 ENPP6Q6UWR7 440 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 GRAMD2AQ8IUY3 354 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 ULK2Q8IYT8 1036 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 ZNF607Q96SK3 696 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 TP63Q9H3D4 680 aaPredicted RBP13.63□□□□□ -0.23
CD9-210ENST00000543916 ZNF232Q9UNY5 417 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 MEMO1Q9Y316 297 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 FAM215AQ9Y5M1 114 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 MED12Q93074 2177 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 ARHGAP21Q5T5U3 1957 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 FIGNL2A6NMB9 653 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 ETV2O00321 342 aaPredicted RBP13.62□□□□□ -0.23
CD9-210ENST00000543916 FRS3O43559 492 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 EFNA2O43921 213 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 WDR1O75083 606 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 MFN2O95140 757 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 OPN1SWP03999 348 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 GKN3PP0CG01 181 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 RNF224P0DH78 156 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 PRG2P13727 222 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 ZNF708P17019 499 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 POU3F2P20265 443 aaPredicted RBP13.62□□□□□ -0.23
CD9-210ENST00000543916 ACVR2AP27037 513 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 PRKAR1BP31321 381 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 SLC6A8P48029 635 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 CRYBA2P53672 197 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 CLDN15P56746 228 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 CLDN20P56880 219 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 SRYQ05066 204 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 LIPEQ05469 1076 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 DMTNQ08495 405 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 EPS8Q12929 822 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 SLC25A53Q5H9E4 307 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 DHRS4L2Q6PKH6 230 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 LSRQ86X29 649 aaPredicted RBP13.62□□□□□ -0.23
CD9-210ENST00000543916 PM20D2Q8IYS1 436 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 UBQLNLQ8IYU4 475 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 MICU2Q8IYU8 434 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 MARVELD2Q8N4S9 558 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 OR2T12Q8NG77 320 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 SMPDL3BQ92485 455 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 DMRTA2Q96SC8 542 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 SPATA5L1Q9BVQ7 753 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 ACER3Q9NUN7 267 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 ABCD2Q9UBJ2 740 aa13.62□□□□□ -0.23
CD9-210ENST00000543916 PHF3Q92576 2039 aaKnown RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 PRORSD1PA6NEY8 169 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 E9PLN8 166 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 H0YC42 278 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 LINC01387J3KSC0 135 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 M0QX08 132 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 AGFG2O95081 481 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ESRRAP11474 423 aaPredicted RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 PEPDP12955 493 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 EIF1P41567 113 aaKnown RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 ACAA2P42765 397 aaKnown RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 IDH2P48735 452 aaKnown RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 GSK3BP49841 420 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 TPD52P55327 224 aaPredicted RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 SESN3P58005 492 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 SLC25A3Q00325 362 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 VEZF1Q14119 521 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 BCL2A1Q16548 175 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ZSWIM7Q19AV6 140 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ACSF3Q4G176 576 aaPredicted RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 C1orf185Q5T7R7 199 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 INTS11Q5TA45 600 aaKnown RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 CCDC80Q76M96 950 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 PATL1Q86TB9 770 aaKnown RBP13.61□□□□□ -0.23
CD9-210ENST00000543916 GGNQ86UU5 652 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ARMC8Q8IUR7 673 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ZNF440Q8IYI8 595 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 FAM26EQ8N5C1 309 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 SMYD1Q8NB12 490 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ZNF563Q8TA94 476 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 ST8SIA1Q92185 356 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 TAMM41Q96BW9 452 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 CCDC120Q96HB5 630 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 MRGPRX4Q96LA9 322 aa13.61□□□□□ -0.23
CD9-210ENST00000543916 VKORC1Q9BQB6 163 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms