RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	EVA1A	Q9H8M9	152 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	TMEM27	Q9HBJ8	222 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	QPCTL	Q9NXS2	382 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	SELENON	Q9NZV5	590 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	CHST2	Q9Y4C5	530 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	LOC400499	M0QZD8	3231 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZZEF1	O43149	2961 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	SPTA1	P02549	2419 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	TRGV5	A0A0B4J1U4	118 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	SHISA8	B8ZZ34	492 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ACOT8	O14734	319 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZIC3	O60481	467 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	IFNW1	P05000	195 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	HPN	P05981	417 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	NQO1	P15559	274 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	IFNA8	P32881	189 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	EIF1	P41567	113 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ACAA2	P42765	397 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	MLLT10	P55197	1068 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	SESN3	P58005	492 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	KCNC4	Q03721	635 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	NRF1	Q16656	503 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	PRR30	Q53SZ7	412 aa	Predicted RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	LCN8	Q6JVE9	175 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	POMZP3	Q6PJE2	187 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ENPP6	Q6UWR7	440 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	COMTD1	Q86VU5	262 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	RBM45	Q8IUH3	476 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	FAM71C	Q8NEG0	241 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ATP6V1C2	Q8NEY4	427 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	OR6T1	Q8NGN1	323 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	FAR1	Q8WVX9	515 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	GEMIN6	Q8WXD5	167 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	SLC35B4	Q969S0	331 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZBTB8A	Q96BR9	441 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	RSRC1	Q96IZ7	334 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	SEPHS2	Q99611	448 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	MCHR1	Q99705	422 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ARHGDIG	Q99819	225 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	KLHDC3	Q9BQ90	382 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZNF559	Q9BR84	538 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	PIGQ	Q9BRB3	760 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	PRR14	Q9BWN1	585 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	RSPO3	Q9BXY4	272 aa	Predicted RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	UGT2B28	Q9BY64	529 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	TRIM2	Q9C040	744 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	SLC6A15	Q9H2J7	730 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	UBQLN3	Q9H347	655 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	CTPS2	Q9NRF8	586 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	ASF1B	Q9NVP2	202 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	AURKC	Q9UQB9	309 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	NTNG1	Q9Y2I2	539 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	SLC6A5	Q9Y345	797 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	FAM32A	Q9Y421	112 aa	Known RBP	9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	USP24	Q9UPU5	2620 aa		9.22	□□□□□ -0.93
CPSF7-221	ENST00000543545	PIEZO2	Q9H5I5	2752 aa		9.21	□□□□□ -0.93
CPSF7-221	ENST00000543545	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	AQP12B	A6NM10	295 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	CPSF4L	A6NMK7	179 aa	Known RBP	9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545		B4DXG7	233 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	ANKRD65	E5RJM6	399 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	ADAM11	O75078	769 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	EPPIN	O95925	133 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	CCNA2	P20248	432 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	MST1	P26927	711 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	SLC1A3	P43003	542 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	YAP1	P46937	504 aa	Known RBP	9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	TAS2R41	P59536	307 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	FOXK1	P85037	733 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	PLAUR	Q03405	335 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	CHRNB3	Q05901	458 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	MERTK	Q12866	999 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	FOXF1	Q12946	379 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	OR1Q1	Q15612	314 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	PLPPR5	Q32ZL2	321 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	GLYR1	Q49A26	553 aa	Predicted RBP	9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	FAM98B	Q52LJ0	330 aa	Known RBP	9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	KRTCAP3	Q53RY4	240 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	CMPK2	Q5EBM0	449 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	WBP2NL	Q6ICG8	309 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	AAGAB	Q6PD74	315 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	PLEKHM3	Q6ZWE6	761 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	CYP4Z1	Q86W10	505 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	LACC1	Q8IV20	430 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	AQP12A	Q8IXF9	295 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	FAM86B1	Q8N7N1	296 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	OR4D11	Q8NGI4	311 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	CPT1C	Q8TCG5	803 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	ST8SIA1	Q92185	356 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	SMPDL3B	Q92485	455 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	NR4A3	Q92570	626 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	POP5	Q969H6	163 aa	Known RBP	9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	UTP4	Q969X6	686 aa	Known RBP	9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	RELT	Q969Z4	430 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	SLC47A1	Q96FL8	570 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	MRGPRX4	Q96LA9	322 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	WFDC6	Q9BQY6	131 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	OR2B2	Q9GZK3	357 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	ZDHHC11	Q9H8X9	412 aa		9.21	□□□□□ -0.94
CPSF7-221	ENST00000543545	ACKR4	Q9NPB9	350 aa		9.21	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms