RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TP53P04637 393 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 CYC1P08574 325 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 GSTM3P21266 225 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 ADH7P40394 386 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 PNLIPRP2P54317 469 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 NR1H2P55055 460 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 CDC42P60953 191 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TUBA4AP68366 448 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TSPAN31Q12999 210 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TOP3AQ13472 1001 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 ALG10BQ5I7T1 473 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 FNDC7Q5VTL7 733 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 CBLN3Q6UW01 205 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 C6orf15Q6UXA7 325 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 OR2Y1Q8NGV0 311 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 RHOXF1Q8NHV9 184 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 APH1BQ8WW43 257 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 SLC35B4Q969S0 331 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 LIN37Q96GY3 246 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 ZPBPQ9BS86 351 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 RTN4RQ9BZR6 473 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TRIM2Q9C040 744 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 DSN1Q9H410 356 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 IMPAD1Q9NX62 359 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 ZNF226Q9NYT6 803 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 BLOC1S6Q9UL45 172 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 NPFFR2Q9Y5X5 522 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 NUP210LQ5VU65 1888 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 A0A1W2PNU3 283 aaPredicted RBP10.1□□□□□ -0.79
SCG3-202ENST00000542355 C9orf172C9J069 976 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 ZNF264O43296 627 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 ZNF354AO60765 605 aaPredicted RBP10.1□□□□□ -0.79
SCG3-202ENST00000542355 LRP3O75074 770 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 WBP4O75554 376 aaKnown RBP10.1□□□□□ -0.79
SCG3-202ENST00000542355 LINGO3P0C6S8 592 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 CCDC159P0C7I6 412 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 UBL4AP11441 157 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 TCN2P20062 427 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 COPZ1P61923 177 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 PIGFQ07326 219 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 HES3Q5TGS1 186 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 STPG1Q5TH74 334 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 KIRREL2Q6UWL6 708 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 TIPARPQ7Z3E1 657 aaKnown RBP10.1□□□□□ -0.79
SCG3-202ENST00000542355 MARCH3Q86UD3 253 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 P3H2Q8IVL5 708 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 RNF113BQ8IZP6 322 aaKnown RBP10.1□□□□□ -0.79
SCG3-202ENST00000542355 OR5L2Q8NGL0 311 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 OR5M3Q8NGP4 307 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 PFN4Q8NHR9 129 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 NUBPLQ8TB37 319 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 LRFN3Q9BTN0 628 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 EGLN3Q9H6Z9 239 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 TUBA8Q9NY65 449 aaPredicted RBP10.1□□□□□ -0.79
SCG3-202ENST00000542355 RPS6KB2Q9UBS0 482 aa10.1□□□□□ -0.79
SCG3-202ENST00000542355 RALGAPA1Q6GYQ0 2036 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 LOC102723996A0A087X1L8 192 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 TMEM200CA6NKL6 621 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 GNB5O14775 395 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 OIP5O43482 229 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CHP2O43745 196 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 GMFGO60234 142 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 ZFAND5O76080 213 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 LCN1P31025 176 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 GIPRP48546 466 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CCR4P51679 360 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CXCR4P61073 352 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 PCOLCEQ15113 449 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 BTBD16Q32M84 506 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 NADK2Q4G0N4 442 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 C3orf38Q5JPI3 329 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 ULK3Q6PHR2 472 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 PTCHD4Q6ZW05 846 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 KRT77Q7Z794 578 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 PIP4P1Q86T03 277 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 KIF18BQ86Y91 864 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CCDC103Q8IW40 242 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 IQCF1Q8N6M8 205 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 TMCO5AQ8N6Q1 288 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 DEFB124Q8NES8 71 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 OIT3Q8WWZ8 545 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 SH3YL1Q96HL8 342 aaPredicted RBP10.09□□□□□ -0.79
SCG3-202ENST00000542355 DDA1Q9BW61 102 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 TBL1XR1Q9BZK7 514 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 PLA2G12AQ9BZM1 189 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 KRCC1Q9NPI7 259 aaPredicted RBP10.09□□□□□ -0.79
SCG3-202ENST00000542355 ATP13A2Q9NQ11 1180 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 C20orf141Q9NUB4 165 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 PAK1IP1Q9NWT1 392 aaPredicted RBP10.09□□□□□ -0.79
SCG3-202ENST00000542355 SELENONQ9NZV5 590 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 OR6C70A6NIJ9 312 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 C17orf51A8MQB3 221 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CDC42EP2O14613 210 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 IFI30P13284 250 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 FPR3P25089 353 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 FOLR3P41439 243 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 STAT5AP42229 794 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 SKP2Q13309 424 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms