RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RCHY1Q96PM5 261 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 RIT2Q99578 217 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 NPAS2Q99743 824 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 RBM4Q9BWF3 364 aaKnown RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 TDRD3Q9H7E2 651 aaKnown RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 MOB1AQ9H8S9 216 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 MEAF6Q9HAF1 191 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 MED4Q9NPJ6 270 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ESM1Q9NQ30 184 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 RRAGDQ9NQL2 400 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 STARD5Q9NSY2 213 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 DEPPQ9NTK1 212 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 PLCXD1Q9NUJ7 323 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 CRLS1Q9UJA2 301 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 PTBP2Q9UKA9 531 aaKnown RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 KLF2Q9Y5W3 355 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 TTC28Q96AY4 2481 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 LAMA3Q16787 3333 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 VCANP13611 3396 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 MYH15Q9Y2K3 1946 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 MEIOCA2RUB1 952 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 MFSD2BA6NFX1 497 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 PES1O00541 588 aaKnown RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 STX7O15400 261 aaKnown RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 ZSCAN12O43309 604 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 LCMT2O60294 686 aaKnown RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SNNO75324 88 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SERPINA3P01011 423 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 TPM3P06753 285 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 IGFBP1P08833 259 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 HNF1AP20823 631 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 UQCRC2P22695 453 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CCNCP24863 283 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SAA4P35542 130 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 RIDAP52758 137 aaKnown RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 PLA2G16P53816 162 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 RIPK4P57078 832 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SRPXP78539 464 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 TMEM187Q14656 261 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SSX2Q16385 188 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CYBRD1Q53TN4 286 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CAVIN4Q5BKX8 364 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 C10orf120Q5SQS8 335 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 PHYHD1Q5SRE7 291 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 MFSD14CQ5VZR4 134 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 ZSCAN25Q6NSZ9 544 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 BTNL3Q6UXE8 466 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 C3P1Q6ZMU1 363 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 UTS2BQ765I0 119 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CCDC80Q76M96 950 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 RUFY3Q7L099 469 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CEACAM19Q7Z692 300 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CCDC50Q8IVM0 306 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF781Q8N8C0 355 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF248Q8NDW4 579 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 BEST4Q8NFU0 473 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 OR52K2Q8NGK3 314 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 AKR7LQ8NHP1 331 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 HCAR2Q8TDS4 363 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 FAM151AQ8WW52 585 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 LGMNQ99538 433 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CCDC77Q9BR77 488 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SLC30A2Q9BRI3 323 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 TMEM43Q9BTV4 400 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 EDEM2Q9BV94 578 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 LIME1Q9H400 295 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 TM9SF3Q9HD45 589 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 THYN1Q9P016 225 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 GNG12Q9UBI6 72 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SEC14L3Q9UDX4 400 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 CDH9Q9ULB4 789 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 FBXO7Q9Y3I1 522 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 PIEZO1Q92508 2521 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
SNHG1-217ENST00000541578 DDX60LQ5H9U9 1706 aaKnown RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 ZNFX1Q9P2E3 1918 aaKnown RBP3.52□□□□□ -1.85
SNHG1-217ENST00000541578 SPEF2Q9C093 1822 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 RAD50Q92878 1312 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ARAP2Q8WZ64 1704 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 FAM240BA0A1B0GVZ2 78 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 BCLAF3A2AJT9 711 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 XKRY2A2RUG3 117 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF724A8MTY0 619 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 IMPA2O14732 288 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ARPC3O15145 178 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 PPIHO43447 177 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 CCDC130P13994 396 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 GNB3P16520 340 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 OXTRP30559 389 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 STK19P49842 368 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 TMEM50BP56557 158 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 CCNA1P78396 465 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 SARNPP82979 210 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 OTUD4Q01804 1114 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 RGS1Q08116 209 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 GANABQ14697 944 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ATXN7L3Q14CW9 347 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 RCN1Q15293 331 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 SHHQ15465 462 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms