RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GBAP04062 536 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 ADRA2AP08913 450 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 GABRB3P28472 473 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 RPL15P61313 204 aaKnown RBP8.17□□□□□ -1.1
YBX3-211ENST00000541351 CSNK2A1P68400 391 aaPredicted RBP8.17□□□□□ -1.1
YBX3-211ENST00000541351 COL10A1Q03692 680 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 SRSF4Q08170 494 aaKnown RBP8.17□□□□□ -1.1
YBX3-211ENST00000541351 SELENBP1Q13228 472 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 CRYMQ14894 314 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 PDK3Q15120 406 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 C3orf36Q3SXR2 165 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 SPANXN3Q5MJ09 141 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 SAMD5Q5TGI4 173 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 ABHD12BQ7Z5M8 362 aaPredicted RBP8.17□□□□□ -1.1
YBX3-211ENST00000541351 PDPRQ8NCN5 879 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 CEP70Q8NHQ1 597 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 GBP4Q96PP9 640 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 DOK1Q99704 481 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 OCSTAMPQ9BR26 566 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 POPDC3Q9HBV1 291 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 GPC6Q9Y625 555 aaPredicted RBP8.17□□□□□ -1.1
YBX3-211ENST00000541351 WNK2Q9Y3S1 2297 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 CMYA5Q8N3K9 4069 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 PPIAL4EA0A075B759 164 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 PPIAL4CA0A0B4J2A2 164 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 TCRBV7S3A2A0A539 114 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 ALG1L2C9J202 215 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 PPIAL4DF5H284 164 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 LYNX1G3V0Z9 82 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 K7EPI3 171 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 ZNF195O14628 629 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 SYNGR3O43761 229 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 CLDN9O95484 217 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 IGHV3-9P01782 118 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 GSNP06396 782 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 KLK1P06870 262 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 PPIAL4FP0DN26 164 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 LYNX1P0DP58 116 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 SELEP16581 610 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 MPIP34949 423 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 ALDH9A1P49189 494 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 EVX1P49640 407 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 ATP6V0D1P61421 351 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 PSG6Q00889 435 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 TEKQ02763 1124 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 LRRC57Q8N9N7 239 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 WDR31Q8NA23 367 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 OR4N2Q8NGD1 307 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 SGCDQ92629 289 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 ESAMQ96AP7 390 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 TIMD4Q96H15 378 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 ZNF317Q96PQ6 595 aaPredicted RBP8.16□□□□□ -1.1
YBX3-211ENST00000541351 ZNF300Q96RE9 604 aaPredicted RBP8.16□□□□□ -1.1
YBX3-211ENST00000541351 UTS2RQ9UKP6 389 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 CES1P1Q9UKY3 287 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 RNF114Q9Y508 228 aa8.16□□□□□ -1.1
YBX3-211ENST00000541351 IGKV3D-15A0A087WSY6 115 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 IGHV3-15A0A0B4J1V0 119 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 C9JVG2 144 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 CCDC188H7C350 402 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 PIP5K1CO60331 668 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 NUDT14O95848 222 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 TSPAN15O95858 294 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 PRB2P02812 416 aaPredicted RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 OPN1MWP04001 364 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 NGFRP08138 427 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 OPN1MW2P0DN77 364 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 OPN1MW3P0DN78 364 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 EPORP19235 508 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 TYK2P29597 1187 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 UBE2NP61088 152 aaKnown RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 TRA2BP62995 288 aaKnown RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 NAAAQ02083 359 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 LTB4RQ15722 352 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 OTUD3Q5T2D3 398 aaPredicted RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 FAM9CQ8IZT9 166 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 ZCCHC24Q8N2G6 241 aaKnown RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 MMGT1Q8N4V1 131 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 IL17RDQ8NFM7 739 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 B4GALNT2Q8NHY0 566 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 PIGXQ8TBF5 258 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 CERS2Q96G23 380 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 C1orf147Q96MC9 270 aaPredicted RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 TPK1Q9H3S4 243 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 ZNF275Q9NSD4 429 aaPredicted RBP8.15□□□□□ -1.1
YBX3-211ENST00000541351 NMRK1Q9NWW6 199 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 ASH2LQ9UBL3 628 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 PRDM4Q9UKN5 801 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 CMAHPQ9Y471 501 aa8.15□□□□□ -1.1
YBX3-211ENST00000541351 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 C3orf84H3BNL1 204 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 SCDO00767 359 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 XPNPEP2O43895 674 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ULK1O75385 1050 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms