RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 DVL2O14641 736 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 IL18BPO95998 194 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 BCHEP06276 602 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 VIMP08670 466 aaKnown RBP15.18■□□□□ 0.02
CD9-209ENST00000540891 COX6B1P14854 86 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 ELK4P28324 431 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 MDH1P40925 334 aaKnown RBP15.18■□□□□ 0.02
CD9-209ENST00000540891 DLX5P56178 289 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 KCNJ10P78508 379 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 CBFBQ13951 182 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 PON3Q15166 354 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 DLEU7Q6UYE1 221 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 CHMP1BQ7LBR1 199 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 RETREG3Q86VR2 466 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 FNDC9Q8TBE3 224 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 INTS12Q96CB8 462 aaKnown RBP15.18■□□□□ 0.02
CD9-209ENST00000540891 TMEM19Q96HH6 336 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 MRGPRX4Q96LA9 322 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 ZFP3Q96NJ6 502 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 ZNF317Q96PQ6 595 aaPredicted RBP15.18■□□□□ 0.02
CD9-209ENST00000540891 TRIM8Q9BZR9 551 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 IKZF5Q9H5V7 419 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 MTHFD2LQ9H903 347 aaPredicted RBP15.18■□□□□ 0.02
CD9-209ENST00000540891 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.18■□□□□ 0.02
CD9-209ENST00000540891 JKAMPQ9P055 326 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 CRYBG3Q68DQ2 2970 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 HEATR5AQ86XA9 2040 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 SLC22A20A6NK97 555 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 TNFSF11O14788 317 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 ADAMDEC1O15204 470 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 TNFSF13O75888 250 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 TROVE2P10155 538 aaKnown RBP eCLIP15.17■□□□□ 0.02
CD9-209ENST00000540891 OPRM1P35372 400 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 EIF1AXP47813 144 aaKnown RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 SLC6A8P48029 635 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 ARFIP2P53365 341 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 RPS3AP61247 264 aaKnown RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 FBXL19-AS1Q494R0 122 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 RPS26P11Q5JNZ5 115 aaPredicted RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 MEX3BQ6ZN04 569 aaKnown RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 ZNF295-AS1Q8N0V1 137 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 LILRA2Q8N149 483 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 OR10D3Q8NH80 312 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 CNOT9Q92600 299 aaKnown RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 PMM1Q92871 262 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 MAL2Q969L2 176 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 KLHL15Q96M94 604 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 RNF122Q9H9V4 155 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 EXOSC3Q9NQT5 275 aaKnown RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 DNAJB12Q9NXW2 375 aaKnown RBP15.17■□□□□ 0.02
CD9-209ENST00000540891 ZNF175Q9Y473 711 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 CELSR2Q9HCU4 2923 aa15.17■□□□□ 0.02
CD9-209ENST00000540891 AQP8O94778 261 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 DBIP07108 87 aaKnown RBP15.16■□□□□ 0.02
CD9-209ENST00000540891 NID1P14543 1247 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 ASCL1P50553 236 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 CRISP3P54108 245 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 SESN3P58005 492 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 FADDQ13158 208 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 ESPNLQ6ZVH7 1005 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 P4HA3Q7Z4N8 544 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 VRK2Q86Y07 508 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 MCEMP1Q8IX19 187 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 DMRTC2Q8IXT2 367 aaPredicted RBP15.16■□□□□ 0.02
CD9-209ENST00000540891 CMIPQ8IY22 773 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 DPP10Q8N608 796 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 OR2V1Q8NHB1 315 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 WDR60Q8WVS4 1066 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 ST8SIA1Q92185 356 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 SFXN3Q9BWM7 321 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 RAD21L1Q9H4I0 556 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 A4GALTQ9NPC4 353 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 THUMPD1Q9NXG2 353 aaKnown RBP15.16■□□□□ 0.02
CD9-209ENST00000540891 STOML1Q9UBI4 398 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 LEF1Q9UJU2 399 aaPredicted RBP15.16■□□□□ 0.02
CD9-209ENST00000540891 NDUFAF1Q9Y375 327 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 CHST2Q9Y4C5 530 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 MED12LQ86YW9 2145 aa15.16■□□□□ 0.02
CD9-209ENST00000540891 A0A1W2PNV4 684 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 SYT5O00445 386 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 AP3D1O14617 1153 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 CXCL13O43927 109 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 IL7RP16871 459 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 GPX2P18283 190 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 PGCP20142 388 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 ME2P23368 584 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 SFTPDP35247 375 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 SELENBP1Q13228 472 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 GUSBP1Q15486 140 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 SGCBQ16585 318 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 MRPL2Q5T653 305 aaKnown RBP15.15■□□□□ 0.02
CD9-209ENST00000540891 ZNF836Q6ZNA1 936 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 LSRQ86X29 649 aaPredicted RBP15.15■□□□□ 0.02
CD9-209ENST00000540891 OR52P1PQ8NH57 321 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 TSPEARQ8WU66 669 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 CPPED1Q9BRF8 314 aaPredicted RBP15.15■□□□□ 0.02
CD9-209ENST00000540891 COQ10BQ9H8M1 238 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 ACER3Q9NUN7 267 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 RLIMQ9NVW2 624 aa15.15■□□□□ 0.02
CD9-209ENST00000540891 CALML5Q9NZT1 146 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms