RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 B4GALNT2Q8NHY0 566 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 C10orf105Q8TEF2 133 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TLCD1Q96CP7 247 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 EGLN2Q96KS0 407 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 RHNO1Q9BSD3 238 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TMEM109Q9BVC6 243 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 CACNG6Q9BXT2 260 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 CDC42EP4Q9H3Q1 356 aaKnown RBP6.45□□□□□ -1.38
YBX3-209ENST00000540747 TNFRSF12AQ9NP84 129 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 UBQLN4Q9NRR5 601 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 FAIMQ9NVQ4 179 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TMEM216Q9P0N5 145 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ICAM5Q9UMF0 924 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 STK38LQ9Y2H1 464 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ARFGEF3Q5TH69 2177 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 OR5H1A6NKK0 313 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SMIM23A6NLE4 172 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ZNF724A8MTY0 619 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 VWC2LB2RUY7 222 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ANKRD65E5RJM6 399 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 H0YHG0 523 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ZNF195O14628 629 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ABCD4O14678 606 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SMAD9O15198 467 aaKnown RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 CYTIPO60759 359 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 DNAJA2O60884 412 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 LYZL6O75951 148 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 RSL1D1O76021 490 aaKnown RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 PRKD3O94806 890 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ZNF16P17020 682 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 PRKCAP17252 672 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 PTNP21246 168 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 IGHV1-2P23083 117 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 PRPH2P23942 346 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SFTPDP35247 375 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 NUDT6P53370 316 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SEC24CP53992 1094 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SUMO3P55854 103 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 BTKQ06187 659 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SPOCK1Q08629 439 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 PPA1Q15181 289 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 TOMM34Q15785 309 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 VPS26BQ4G0F5 336 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 KLHL26Q53HC5 615 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.44□□□□□ -1.38
YBX3-209ENST00000540747 AGAP6Q5VW22 663 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ABLIM2Q6H8Q1 611 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 NOXRED1Q6NXP6 359 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 CLEC2AQ6UVW9 174 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 CBLN3Q6UW01 205 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 LCA5Q86VQ0 697 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 P2RY8Q86VZ1 359 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SLC43A2Q8N370 569 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ZNF525Q8N782 197 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ZNF433Q8N7K0 673 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 ARIH2OSQ8N7S6 290 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 FBXO27Q8NI29 283 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 GPR151Q8TDV0 419 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 GPR119Q8TDV5 335 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ZFP90Q8TF47 636 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 CIDECQ96AQ7 238 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 SH3YL1Q96HL8 342 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 METTL2AQ96IZ6 378 aaKnown RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 RADILQ96JH8 1075 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ADAD1Q96M93 576 aaKnown RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 MS4A4EQ96PG1 132 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 KCNK17Q96T54 332 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 DHRS9Q9BPW9 319 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 BEX2Q9BXY8 128 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 ALG2Q9H553 416 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 EQTNQ9NQ60 294 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 MIEF1Q9NQG6 463 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 SIRT3Q9NTG7 399 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 CBLN4Q9NTU7 201 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 PRSS50Q9UI38 385 aa6.44□□□□□ -1.38
YBX3-209ENST00000540747 POLR3HQ9Y535 204 aaPredicted RBP6.44□□□□□ -1.38
YBX3-209ENST00000540747 IGKV3D-15A0A087WSY6 115 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 SLC35F4A4IF30 521 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 PDLIM1O00151 329 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 PDPK1O15530 556 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 RIPK2O43353 540 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 H6PDO95479 791 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 HSPA4LO95757 839 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 SHBGP04278 402 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 SNRPAP09012 282 aaKnown RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 TAC1P20366 129 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 RAC3P60763 192 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 HSPB3Q12988 150 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 TMEM176BQ3YBM2 270 aaPredicted RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 ARL13AQ5H913 290 aaPredicted RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 CCNJQ5T5M9 372 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 GKAP1Q5VSY0 366 aaPredicted RBP6.43□□□□□ -1.38
YBX3-209ENST00000540747 CYB5R2Q6BCY4 276 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 ANKRD26P1Q6NSI1 321 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 ZCCHC12Q6PEW1 402 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 SLC22A9Q8IVM8 553 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 NUP43Q8NFH3 380 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 CEP70Q8NHQ1 597 aa6.43□□□□□ -1.38
YBX3-209ENST00000540747 CDC26Q8NHZ8 85 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms