RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CUL1Q13616 776 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 TPSAB1Q15661 275 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 SKA3Q8IX90 412 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 LRRC43Q8N309 656 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 ALLCQ8N6M5 410 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 RSPH1Q8WYR4 309 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 SH3YL1Q96HL8 342 aaPredicted RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 SENP8Q96LD8 212 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 ZNF184Q99676 751 aaPredicted RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 SPATA16Q9BXB7 569 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 NAT10Q9H0A0 1025 aaKnown RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 IL17CQ9P0M4 197 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 CGNQ9P2M7 1197 aaKnown RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 WRAP73Q9P2S5 460 aaPredicted RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 RNF14Q9UBS8 474 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 UBQLN1Q9UMX0 589 aaKnown RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 NPIPA1Q9UND3 350 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 USP16Q9Y5T5 823 aa4.76□□□□□ -1.65
TRAV11-201ENST00000539512 DDX49Q9Y6V7 483 aaKnown RBP4.76□□□□□ -1.65
TRAV11-201ENST00000539512 FRMPD4Q14CM0 1322 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 TUBAL3A6NHL2 446 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 PP2D1A8MPX8 630 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 GMFGO60234 142 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 RNH1P13489 461 aaKnown RBP4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CD1EP15812 388 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 IGLL1P15814 213 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 TIMM10P62072 90 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CNTN2Q02246 1040 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 ZNF45Q02386 682 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 EOGTQ5NDL2 527 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 ATL3Q6DD88 541 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 SCARA5Q6ZMJ2 495 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 MOB3BQ86TA1 216 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 SYT14Q8NB59 555 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 BBS1Q8NFJ9 593 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 LINC01006Q8NI28 216 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 RAB7BQ96AH8 199 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CELF6Q96J87 481 aaKnown RBP4.75□□□□□ -1.65
TRAV11-201ENST00000539512 C7orf34Q96L11 122 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 TTC25Q96NG3 672 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 MCHR1Q99705 422 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CITED1Q99966 193 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CHIAQ9BZP6 476 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 ELOVL3Q9HB03 270 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 PDFQ9HBH1 243 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CD274Q9NZQ7 290 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 ONECUT1Q9UBC0 465 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 DCDC2Q9UHG0 476 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 RPH3ALQ9UNE2 315 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
TRAV11-201ENST00000539512 MRPS7Q9Y2R9 242 aaKnown RBP4.75□□□□□ -1.65
TRAV11-201ENST00000539512 IGHV2-70DA0A0C4DH43 119 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 G3V4G9 280 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 KIF2AO00139 706 aaPredicted RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 XPO1O14980 1071 aaKnown RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 NEBLO76041 1014 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ACTL6AO96019 429 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 LALBAP00709 142 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 CA1P00915 261 aaPredicted RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 DNAH10OSP0CZ25 163 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 NT5EP21589 574 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 GABRR1P24046 479 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 CD80P33681 288 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 CA8P35219 290 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 CBX1P83916 185 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 SELPLGQ14242 412 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 MXD4Q14582 209 aaPredicted RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ATF7IP2Q5U623 682 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 SLC25A24Q6NUK1 477 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 FAM199XQ6PEV8 388 aaPredicted RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 CCDC137Q6PK04 289 aaKnown RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 LCA5Q86VQ0 697 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ATP6V0D2Q8N8Y2 350 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ZNF564Q8TBZ8 553 aaPredicted RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 MRPS31Q92665 395 aaKnown RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 RAB33BQ9H082 229 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ASB8Q9H765 288 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 MEAF6Q9HAF1 191 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 WARS2Q9UGM6 360 aaKnown RBP4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ZNF221Q9UK13 617 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 SCML2Q9UQR0 700 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 IFT52Q9Y366 437 aa4.74□□□□□ -1.65
TRAV11-201ENST00000539512 ATP10DQ9P241 1426 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 NISCHQ9Y2I1 1504 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 RHOBTB1O94844 696 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 GNA14O95837 355 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 ADSSP30520 456 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 RGS4P49798 205 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 ORC2Q13416 577 aaPredicted RBP4.73□□□□□ -1.65
TRAV11-201ENST00000539512 TAF7Q15545 349 aaPredicted RBP4.73□□□□□ -1.65
TRAV11-201ENST00000539512 TRIM16LQ309B1 348 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 TIGITQ495A1 244 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 FAM71F2Q6NXP2 309 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 CCDC50Q8IVM0 306 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 OR5L2Q8NGL0 311 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 TRMT10AQ8TBZ6 339 aaKnown RBP4.73□□□□□ -1.65
TRAV11-201ENST00000539512 OSTF1Q92882 214 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 TUBGCP2Q9BSJ2 902 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 SMYD3Q9H7B4 428 aa4.73□□□□□ -1.65
TRAV11-201ENST00000539512 NUDT15Q9NV35 164 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms