RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 ZC3H14Q6PJT7 736 aaKnown RBP13.05□□□□□ -0.32
CLPB-209ENST00000538039 PRSS41Q7RTY9 318 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 HAVCR2Q8TDQ0 301 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 ADAMTS15Q8TE58 950 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 CAPNS2Q96L46 248 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 GSDMCQ9BYG8 508 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 RNF208Q9H0X6 261 aa13.05□□□□□ -0.32
CLPB-209ENST00000538039 EIF3KQ9UBQ5 218 aaKnown RBP13.05□□□□□ -0.32
CLPB-209ENST00000538039 RPS10-NUDT3A0A1W2PQS6 291 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 IDSB3KWA1 339 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 PLPP2O43688 288 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 RNGTTO60942 597 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 TFP02787 698 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 ZNF888P0CJ79 500 aaPredicted RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 PYCR1P32322 319 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 PPM1AP35813 382 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 CRYZQ08257 329 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 IRF4Q15306 451 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 GSG1Q2KHT4 349 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 ACSM3Q53FZ2 586 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 FAAH2Q6GMR7 532 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 ADGRD2Q7Z7M1 963 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 ZNF707Q96C28 371 aaPredicted RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 SDF2Q99470 211 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 GFI1Q99684 422 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 WDR45Q9Y484 360 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 TRBV23OR9-2A0A075B6M9 112 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 BTN3A3O00478 584 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 P2RX6O15547 441 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 HRGP04196 525 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 OR1Q1Q15612 314 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 Q6ZTK2 550 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 TMEM52Q8NDY8 209 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 TTC9Q92623 222 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 C1QTNF2Q9BXJ5 285 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 PCBD2Q9H0N5 130 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 PIGUQ9H490 435 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 MED17Q9NVC6 651 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 MRPS2Q9Y399 296 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 GPR171O14626 319 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 RAF1P04049 648 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 SLC2A5P22732 501 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 NDUFS1P28331 727 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 RBMS1P29558 406 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 RPS11P62280 158 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLPB-209ENST00000538039 NOGQ13253 232 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 MRPL2Q5T653 305 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 AGBL4Q5VU57 503 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 FIGNL1Q6PIW4 674 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 BRIX1Q8TDN6 353 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 SORCS2Q96PQ0 1159 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 DERL3Q96Q80 235 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 SLC6A17Q9H1V8 727 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 FN3KQ9H479 309 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 TRPV4Q9HBA0 871 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 GLTPQ9NZD2 209 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 ST6GALNAC2Q9UJ37 374 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 SIGLEC7Q9Y286 467 aa13.04□□□□□ -0.32
CLPB-209ENST00000538039 AK6Q9Y3D8 172 aaKnown RBP13.04□□□□□ -0.32
CLPB-209ENST00000538039 A8MUA0 341 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 OR5F1O95221 314 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 PAICSP22234 425 aaKnown RBP13.03□□□□□ -0.32
CLPB-209ENST00000538039 RPS15P62841 145 aaKnown RBP13.03□□□□□ -0.32
CLPB-209ENST00000538039 RUNX2Q13950 521 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
CLPB-209ENST00000538039 FAAP20Q6NZ36 180 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 HS6ST2Q96MM7 605 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 RBP7Q96R05 134 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 IFT27Q9BW83 186 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 CACNG6Q9BXT2 260 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 TEX101Q9BY14 249 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 LRRN3Q9H3W5 708 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 FOLH1BQ9HBA9 442 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 NKIRAS2Q9NYR9 191 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
CLPB-209ENST00000538039 SCML1Q9UN30 329 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 PSMD9O00233 223 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
CLPB-209ENST00000538039 LDB3O75112 727 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 SBK2P0C263 348 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 DDX6P26196 483 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLPB-209ENST00000538039 STOMP27105 288 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 BMP8BP34820 402 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
CLPB-209ENST00000538039 BMP8AQ7Z5Y6 402 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 LNX2Q8N448 690 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 ZNF527Q8NB42 609 aa13.03□□□□□ -0.32
CLPB-209ENST00000538039 OR4E2Q8NGC2 313 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms