RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SPDL1Q96EA4 605 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 LAT2Q9GZY6 243 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 ACBD3Q9H3P7 528 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 ZNF385DQ9H6B1 395 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 SLC25A37Q9NYZ2 338 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
PRKDC-206ENST00000536429 HCFC1P51610 2035 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 A0A0G2JND7 137 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 ETV2O00321 342 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 ADAMDEC1O15204 470 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 DNAJA2O60884 412 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 NR2F1P10589 423 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 NCF2P19878 526 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 EIF1P41567 113 aaKnown RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 ATP4BP51164 291 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 EEFSECP57772 596 aaKnown RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 SIRPAP78324 504 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 HPCAP84074 193 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 SQLEQ14534 574 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 FBXL19-AS1Q494R0 122 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 RPS26P11Q5JNZ5 115 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 PPP4R4Q6NUP7 873 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 LRRC74BQ6ZQY2 392 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 EIF3MQ7L2H7 374 aaKnown RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 LILRA2Q8N149 483 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 ATP6V1C2Q8NEY4 427 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 TOR1AIP2Q8NFQ8 470 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 OR2V1Q8NHB1 315 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 CNOT9Q92600 299 aaKnown RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 RNASE6Q93091 150 aaKnown RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 KLHL15Q96M94 604 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 SRXN1Q9BYN0 137 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 RNF122Q9H9V4 155 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 CLEC4AQ9UMR7 237 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 LIPT1Q9Y234 373 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
PRKDC-206ENST00000536429 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-206ENST00000536429 A0A096LPI6 279 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 AP3D1O14617 1153 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 BCHEP06276 602 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 TFPTP0C1Z6 253 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 RPS4Y1P22090 263 aaKnown RBP11.8□□□□□ -0.52
PRKDC-206ENST00000536429 ME2P23368 584 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 ELK4P28324 431 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 RYKP34925 604 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 SESN3P58005 492 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 DSTNP60981 165 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 RPS3AP61247 264 aaKnown RBP11.8□□□□□ -0.52
PRKDC-206ENST00000536429 KCNJ10P78508 379 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 GUCY1A3Q02108 690 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 TLE4Q04727 773 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 CBFBQ13951 182 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 GUSBP1Q15486 140 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 SGCBQ16585 318 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 TMEM176BQ3YBM2 270 aaPredicted RBP11.8□□□□□ -0.52
PRKDC-206ENST00000536429 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 HBMQ6B0K9 141 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 ESPNLQ6ZVH7 1005 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 BTLAQ7Z6A9 289 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 CNEP1R1Q8N9A8 125 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 SLC38A5Q8WUX1 472 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 STON2Q8WXE9 905 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 MAL2Q969L2 176 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 STARD4Q96DR4 205 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 C14orf79Q96F83 325 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 ZFP3Q96NJ6 502 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 IKZF5Q9H5V7 419 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 COQ10BQ9H8M1 238 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
PRKDC-206ENST00000536429 FGFR1OP2Q9NVK5 253 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 DNAJB12Q9NXW2 375 aaKnown RBP11.8□□□□□ -0.52
PRKDC-206ENST00000536429 CRIM1Q9NZV1 1036 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 SLC35A3Q9Y2D2 325 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 PDZD2O15018 2839 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
PRKDC-206ENST00000536429 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 TRBV5-3A0A0A0MS03 114 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 A0A1W2PNR3 127 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 CLIC1O00299 241 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 NID1P14543 1247 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 KLK2P20151 261 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 ADH6P28332 368 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 ANXA11P50995 505 aaKnown RBP11.79□□□□□ -0.52
PRKDC-206ENST00000536429 TXNL4AP83876 142 aaKnown RBP11.79□□□□□ -0.52
PRKDC-206ENST00000536429 RGNQ15493 299 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 LRIF1Q5T3J3 769 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 VRK2Q86Y07 508 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 ZZZ3Q8IYH5 903 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 ROBO4Q8WZ75 1007 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 OSTF1Q92882 214 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 TMEM19Q96HH6 336 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 LURAP1Q96LR2 239 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 RBM24Q9BX46 236 aaKnown RBP11.79□□□□□ -0.52
PRKDC-206ENST00000536429 TMEM120AQ9BXJ8 343 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
PRKDC-206ENST00000536429 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms