RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 FCGR1BQ92637 280 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 OR2A14Q96R47 310 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 KAT8Q9H7Z6 458 aaKnown RBP7.39□□□□□ -1.23
CTNND1-230ENST00000532245 OCIAD1Q9NX40 245 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 COMMD9Q9P000 198 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 ING4Q9UNL4 249 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 TMED7-TICAM2A0A0A6YYA0 188 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 IGHV3-9P01782 118 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 APOC1P02654 83 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 HSD17B1P14061 328 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 GADD45AP24522 165 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 FAM53BQ14153 422 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 MFSD12Q6NUT3 480 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 ANKK1Q8NFD2 765 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 ZNF419Q96HQ0 510 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-230ENST00000532245 PRRC1Q96M27 445 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 RLIMQ9NVW2 624 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 PARPBPQ9NWS1 579 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 P4HTMQ9NXG6 502 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 PCDHB10Q9UN67 800 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 PLEKHA6Q9Y2H5 1048 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 EXOSC1Q9Y3B2 195 aaKnown RBP7.39□□□□□ -1.23
CTNND1-230ENST00000532245 TMED7Q9Y3B3 224 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 PCDHGB2Q9Y5G2 931 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 B3GALT1Q9Y5Z6 326 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 ARNTLO00327 626 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 SPINT1O43278 529 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 IGHG1P01857 330 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 CELP19835 753 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 HOXD12P35452 270 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 CDH15P55291 814 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 CAMK2DQ13557 499 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 SELPLGQ14242 412 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 BCL2L15Q5TBC7 163 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 GFRALQ6UXV0 394 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 NINJ1Q92982 152 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 ZMYND19Q96E35 227 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-230ENST00000532245 TRIB1Q96RU8 372 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 CXorf21Q9HAI6 301 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 PCDHB16Q9NRJ7 776 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 BAIAP2Q9UQB8 552 aa7.39□□□□□ -1.23
CTNND1-230ENST00000532245 SLC16A7O60669 478 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 CHRM4P08173 479 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 MAPK3P27361 379 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 GLO1Q04760 184 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ANKDD1AQ495B1 522 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 TCTN3Q6NUS6 607 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 OR8J1Q8NGP2 316 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ZNF300Q96RE9 604 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 YARS2Q9Y2Z4 477 aaKnown RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 A0A1B0GW55 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 CCDC182A6NF36 153 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 HRO43593 1189 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 MITFO75030 526 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 SORBS2O94875 1100 aaKnown RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ADAP00813 363 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4L2P0CJ85 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4L3P0CJ86 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4L4P0CJ87 422 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4L5P0CJ88 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4L6P0CJ89 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4L7P0CJ90 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 BMP4P12644 408 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 STT3AP46977 705 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 CLDN6P56747 220 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 PCBP4P57723 403 aaKnown RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 TAS2R43P59537 309 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 SLC35A1P78382 337 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 SCRN3Q0VDG4 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 RUNX2Q13950 521 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 SPIN3Q5JUX0 258 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 COX20Q5RI15 118 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ZNF227Q86WZ6 799 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 NPRL2Q8WTW4 380 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 DUX4Q9UBX2 424 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 NKX1-2Q9UD57 310 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 TVP23AA6NH52 213 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 J3KTA2 159 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 GATBO75879 557 aaKnown RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 HLA-DPB1P04440 258 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 IGHV4-34P06331 123 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 HOXC4P09017 264 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 UQCRC1P31930 480 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ACTC1P68032 377 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ACTA1P68133 377 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ST3GAL4Q11206 333 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 MICAQ29983 383 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ZNF829Q3KNS6 432 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ABCA11PQ4W5N1 156 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 MORN4Q8NDC4 146 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 NUDT8Q8WV74 236 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 EID2BQ96D98 161 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 FAM71F1Q96KD3 344 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 SPNS1Q9H2V7 528 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 TESQ9UGI8 421 aaKnown RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 ZNF337Q9Y3M9 751 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 WIF1Q9Y5W5 379 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 METTL21EPA6NDL7 271 aa7.38□□□□□ -1.23
CTNND1-230ENST00000532245 KDM4EB2RXH2 506 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-230ENST00000532245 WRBO00258 174 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms