RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 INTS11Q5TA45 600 aaKnown RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 HMGN2P46Q86SG4 172 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 KRT73Q86Y46 540 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 PGAM4Q8N0Y7 254 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 CLIP4Q8N3C7 705 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 FBXO27Q8NI29 283 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 POC1BQ8TC44 478 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 POP5Q969H6 163 aaKnown RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 NPAS1Q99742 590 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 PIGQQ9BRB3 760 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 SPATA5L1Q9BVQ7 753 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 UGT2B28Q9BY64 529 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 SPAG4Q9NPE6 437 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF232Q9UNY5 417 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 SLC6A5Q9Y345 797 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 NCOA6Q14686 2063 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 PRORSD1PA6NEY8 169 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 SERPINB7O75635 380 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ZNF708P17019 499 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 PRKCAP17252 672 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ELK4P28324 431 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 EIF1P41567 113 aaKnown RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 SLC6A8P48029 635 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 RNF144AP50876 292 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ZNF41P51814 821 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 LIPEQ05469 1076 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 EPS8Q12929 822 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 TOMM20Q15388 145 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 TOMM34Q15785 309 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 DCST1Q5T197 706 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 AAGABQ6PD74 315 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ADGRE4PQ86SQ3 457 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 DOLPP1Q86YN1 238 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 MICU2Q8IYU8 434 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 TNIP2Q8NFZ5 429 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 OR2T12Q8NG77 320 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ST8SIA1Q92185 356 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ABTB1Q969K4 478 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-206ENST00000531480 WDYHV1Q96HA8 205 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 MRGPRX4Q96LA9 322 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 EVA1AQ9H8M9 152 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 RLIMQ9NVW2 624 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 USP22Q9UPT9 525 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 HECTD1Q9ULT8 2610 aa13.08□□□□□ -0.32
CPSF1-206ENST00000531480 ELOVL7A1L3X0 281 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 TMEM229AB2RXF0 380 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 NPIPA2E9PIF3 369 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 NPIPA3F8WFD2 350 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 M0QX08 132 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 SYT5O00445 386 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 PRRG2O14669 202 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 ZNHIT1O43257 154 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 TPST1O60507 370 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 GMNNO75496 209 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 C8BP07358 591 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 ABOP16442 354 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 PGCP20142 388 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 GSK3BP49841 420 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 CLDN18P56856 261 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 QPRTQ15274 297 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 C3AR1Q16581 482 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 EIF2S3LQ2VIR3 472 aaKnown RBP13.07□□□□□ -0.32
CPSF1-206ENST00000531480 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 C4orf17Q53FE4 359 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 COMTD1Q86VU5 262 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 PM20D2Q8IYS1 436 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 TAMM41Q96BW9 452 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 SFXN2Q96NB2 322 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 PINK1Q9BXM7 581 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 ALG2Q9H553 416 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 ARMC7Q9H6L4 198 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 PNPLA3Q9NST1 481 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 ACER3Q9NUN7 267 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 OSGIN2Q9Y236 505 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 VDAC3Q9Y277 283 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 RPH3AQ9Y2J0 694 aaPredicted RBP13.07□□□□□ -0.32
CPSF1-206ENST00000531480 ZNF337Q9Y3M9 751 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 AP4B1Q9Y6B7 739 aa13.07□□□□□ -0.32
CPSF1-206ENST00000531480 AHRRA9YTQ3 701 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 EFNA2O43921 213 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 WDR1O75083 606 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 HOXD4P09016 255 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-206ENST00000531480 HSD17B1P14061 328 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 CD247P20963 164 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 AQP1P29972 269 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 PTGER4P35408 488 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 GCKP35557 465 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 KCNJ5P48544 419 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ZNF136P52737 540 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 CLDN15P56746 228 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms