RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ALG1L2C9J202 215 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 KIF2AO00139 706 aaPredicted RBP7.14□□□□□ -1.27
CD44-232ENST00000531118 PDE5AO76074 875 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 IFNGR1P15260 489 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 FSTP19883 344 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 RAB6AP20340 208 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 ELK3P41970 407 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 PSMD4P55036 377 aaKnown RBP7.14□□□□□ -1.27
CD44-232ENST00000531118 RAB10P61026 200 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 POU4F1Q01851 419 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 SLC18A2Q05940 514 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 MGAT5Q09328 741 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 GALNT1Q10472 559 aaPredicted RBP7.14□□□□□ -1.27
CD44-232ENST00000531118 FRG1Q14331 258 aaKnown RBP7.14□□□□□ -1.27
CD44-232ENST00000531118 EFNB3Q15768 340 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 TSNAXIP1Q2TAA8 658 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 FBLN7Q53RD9 439 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 ABLIM2Q6H8Q1 611 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 GOLGA7Q7Z5G4 137 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 SPATA19Q7Z5L4 167 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 ZNF100Q8IYN0 542 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 ZNF786Q8N393 782 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 TEX29Q8N6K0 151 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 L3MBTL4Q8NA19 623 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 RNF214Q8ND24 703 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 OR51F2Q8NH61 342 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 CLDND2Q8NHS1 167 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 FBLIM1Q8WUP2 373 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 WDR60Q8WVS4 1066 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 TM4SF18Q96CE8 201 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 TSPAN17Q96FV3 270 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 SH3YL1Q96HL8 342 aaPredicted RBP7.14□□□□□ -1.27
CD44-232ENST00000531118 RHOVQ96L33 236 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 RAB1BQ9H0U4 201 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 PLK3Q9H4B4 646 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 TAS2R16Q9NYV7 291 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 TAS2R9Q9NYW1 312 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 MALT1Q9UDY8 824 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 PSME2Q9UL46 239 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 MOKQ9UQ07 419 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 RNF11Q9Y3C5 154 aa7.14□□□□□ -1.27
CD44-232ENST00000531118 GJE1A6NN92 205 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 ZNF724A8MTY0 619 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 C9JVG2 144 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 DNALI1O14645 258 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 CYTIPO60759 359 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 PSMG1O95456 288 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 OXSR1O95747 527 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 BCL10O95999 233 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 IGKV1D-16P01601 117 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 TFP02787 698 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 ITGA5P08648 1049 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 NUDT17P0C025 328 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 LINGO3P0C6S8 592 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 SAGP10523 405 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 DDX5P17844 614 aaKnown RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 GCH1P30793 250 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 SERPINF1P36955 418 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 PRIM2P49643 509 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 KHKP50053 298 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 FOXG1P55316 489 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 IL13RA1P78552 427 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 RASGEF1BQ0VAM2 473 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 ZKSCAN8Q15776 578 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 ADIPOQQ15848 244 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 GABRA6Q16445 453 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 FBXW9Q5XUX1 488 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 HDXQ7Z353 690 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 GALNT5Q7Z7M9 940 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 TMEM139Q8IV31 216 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 UBE2J2Q8N2K1 259 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 C17orf78Q8N4C9 275 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 WDR31Q8NA23 367 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 STAG3L4Q8TBR4 150 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 ACTRT2Q8TDY3 377 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 TRPC4APQ8TEL6 797 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 NEU4Q8WWR8 484 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 ZNF75CPQ92670 426 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 EXOSC8Q96B26 276 aaKnown RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 UBXN10Q96LJ8 280 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 C1QTNF5Q9BXJ0 243 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 SLITRK2Q9H156 845 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 MMP27Q9H306 513 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 NARFLQ9H6Q4 476 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 G6PC2Q9NQR9 355 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 CA10Q9NS85 328 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 DDX28Q9NUL7 540 aaKnown RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 AHSPQ9NZD4 102 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 FBXO9Q9UK97 447 aaPredicted RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 MRTO4Q9UKD2 239 aaKnown RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 MTO1Q9Y2Z2 717 aaKnown RBP7.13□□□□□ -1.27
CD44-232ENST00000531118 AMDHD2Q9Y303 409 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 ACOT9Q9Y305 439 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 CORINQ9Y5Q5 1042 aa7.13□□□□□ -1.27
CD44-232ENST00000531118 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
CD44-232ENST00000531118 GXYLT2A0PJZ3 443 aa7.12□□□□□ -1.27
CD44-232ENST00000531118 HMX2A2RU54 273 aa7.12□□□□□ -1.27
CD44-232ENST00000531118 DNAJC9-AS1A6NH13 148 aa7.12□□□□□ -1.27
CD44-232ENST00000531118 EFNA2O43921 213 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms