RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 FCARP24071 287 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 OXTRP30559 389 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 HOXA9P31269 272 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CCT3P49368 545 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 GDI2P50395 445 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 TNFSF10P50591 281 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 TPMTP51580 245 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 IST1P53990 364 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 DVL1P1P54792 670 aaPredicted RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 HERV-K104P63124 156 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 POU3F1Q03052 451 aaPredicted RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 TAF10Q12962 218 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CALCOCO2Q13137 446 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 PIGHQ14442 188 aaPredicted RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 CASP8Q14790 479 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 EXT1Q16394 746 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CAMK4Q16566 473 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 IZUMO4Q1ZYL8 232 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 C6orf226Q5I0X4 101 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 DCAF10Q5QP82 559 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CDC42EP5Q6NZY7 148 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 TMEM107Q6UX40 140 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 WASH2PQ6VEQ5 465 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CENPUQ71F23 418 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RBM45Q8IUH3 476 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 TDHQ8IZJ6 230 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 SELENOHQ8IZQ5 122 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 LGI2Q8N0V4 545 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RFLNBQ8N5W9 214 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 OR4A15Q8NGL6 344 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 OR13A1Q8NGR1 328 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 OR52N5Q8NH56 324 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RHEBL1Q8TAI7 183 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 UBTD2Q8WUN7 234 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 ST8SIA1Q92185 356 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CD101Q93033 1021 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 SLC38A4Q969I6 547 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CAPNS2Q96L46 248 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 TECTBQ96PL2 329 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 KRT12Q99456 494 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 WRAP53Q9BUR4 548 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 RBM24Q9BX46 236 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 ANGPTL4Q9BY76 406 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 POTEKPQ9BYX7 375 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 UPF3BQ9BZI7 483 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 RAB1BQ9H0U4 201 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 ELOVL6Q9H5J4 265 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 SMYD3Q9H7B4 428 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 TLE6Q9H808 572 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 MTHFD2LQ9H903 347 aaPredicted RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 NTN4Q9HB63 628 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 LYRM4Q9HD34 91 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RAB18Q9NP72 206 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.19□□□□□ -1.74
CD44-220ENST00000525688 SMOXQ9NWM0 555 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 PSORS1C1Q9UIG5 152 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RNF115Q9Y4L5 304 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 PAPPA2Q9BXP8 1791 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 MROH7-TTC4A0A0A0MT08 1334 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CENPFP49454 3210 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 RPAP1Q9BWH6 1393 aaPredicted RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 THSD7BQ9C0I4 1608 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 C1orf232A0A0U1RR37 186 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 LOC390937A0A1W2PQ73 354 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 OR5K4A6NMS3 321 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TCP10L2B9ZVM9 353 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 E7ENQ6 273 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TEX46H3BTG2 121 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 GOLGA8RI6L899 631 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CHEK1O14757 476 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 SCAMP2O15127 329 aaKnown RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 CCNB2O95067 398 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 H6PDO95479 791 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CST1P01037 141 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 HLA-DRAP01903 254 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 IGHV4-31P0DP07 118 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 PAX1P15863 534 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CA6P23280 308 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 PSMB6P28072 239 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CD40LGP29965 261 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 DCTP40126 519 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 ARRB1P49407 418 aaPredicted RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 NDST2P52849 883 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CDH11P55287 796 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 GPX6P59796 221 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 SULT2A1Q06520 285 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CDH17Q12864 832 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 ILKQ13418 452 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 NONOQ15233 471 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD44-220ENST00000525688 MICBQ29980 383 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 ZNF470Q6ECI4 717 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 OR4A47Q6IF82 309 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 UGT3A1Q6NUS8 523 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TMIGD1Q6UXZ0 262 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 C9orf139Q6ZV77 190 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CYP4V2Q6ZWL3 525 aaPredicted RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 MOB2Q70IA6 237 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 DCXRQ7Z4W1 244 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CYP4Z1Q86W10 505 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 PLCZ1Q86YW0 608 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms