RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FAM27E3Q08E93 113 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 LRRC74AQ0VAA2 488 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 SKP2Q13309 424 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 CBFBQ13951 182 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 FGFBP1Q14512 234 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 TMEM176BQ3YBM2 270 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 LSRQ86X29 649 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF619Q8N2I2 560 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 FAM222BQ8WU58 562 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 ROBO4Q8WZ75 1007 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 KLHL15Q96M94 604 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 SAP130Q9H0E3 1048 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 DNAJB12Q9NXW2 375 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 GPC6Q9Y625 555 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 FAM234BA2RU67 622 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 MSTNO14793 375 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 ADAMDEC1O15204 470 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 TGDSO95455 350 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 KRT75O95678 551 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 PLGP00747 810 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 CHRM4P08173 479 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 NR2F1P10589 423 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 RYKP34925 604 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 PGM1P36871 562 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 CARD18P57730 90 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 HPCAP84074 193 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 C6orf10Q5SRN2 563 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 PDSS1Q5T2R2 415 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC2A7Q6PXP3 512 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF474Q6S9Z5 364 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 EIF3MQ7L2H7 374 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 CDH24Q86UP0 819 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZFP90Q8TF47 636 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 CKAP2Q8WWK9 683 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 AURKBQ96GD4 344 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 ITCHQ96J02 903 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 POLDIP3Q9BY77 421 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 SRXN1Q9BYN0 137 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 RMND5AQ9H871 391 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 POLE3Q9NRF9 147 aa11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 MCTS1Q9ULC4 181 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-205ENST00000525079 UQCRHLA0A096LP55 91 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 A6NNC1 897 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 ENO4A6NNW6 628 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 CTAG2O75638 210 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 NTN1O95631 604 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 CGAP01215 116 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 GUSBP08236 651 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 EPXP11678 715 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 FCGR2AP12318 317 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 ETFAP13804 333 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 CD1EP15812 388 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 ELK4P28324 431 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 ADH6P28332 368 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 PEX19P40855 299 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 CRATP43155 626 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 KCNJ5P48544 419 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 ANXA11P50995 505 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 MVDP53602 400 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 SESN3P58005 492 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 STX1BP61266 288 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 KCNJ10P78508 379 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 SORDQ00796 357 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 MERTKQ12866 999 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 MAPK11Q15759 364 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC25A53Q5H9E4 307 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 FAM214BQ7L5A3 538 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 CNOT9Q92600 299 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 MRGPRX4Q96LA9 322 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 MAGEB18Q96M61 343 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 TRNT1Q96Q11 434 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 CCDC28BQ9BUN5 200 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 TPT1P8Q9HAU6 139 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 PAQR5Q9NXK6 330 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 LIPT1Q9Y234 373 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 HEATR5AQ86XA9 2040 aa11.5□□□□□ -0.57
TRAPPC4-205ENST00000525079 TACC2O95359 2948 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 IGHV3-15A0A0B4J1V0 119 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 GJE1A6NN92 205 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZCCHC18P0CG32 403 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 PGCP20142 388 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 CTBP2P56545 445 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 PLAURQ03405 335 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 GUSBP1Q15486 140 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 EXOC3L2Q2M3D2 409 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 FBXW10Q5XX13 1052 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 LRRC74BQ6ZQY2 392 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 MSANTD1Q6ZTZ1 278 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 FUNDC1Q8IVP5 155 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF563Q8TA94 476 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 GTF2H4Q92759 462 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 DNAJA3Q96EY1 480 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms