RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OR10A4Q9H209 315 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 CBLCQ9ULV8 474 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 GABRB3P28472 473 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 DPTQ07507 201 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 LRFN4Q6PJG9 635 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 LIX1LQ8IVB5 337 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 PARP16Q8N5Y8 322 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 NETO1Q8TDF5 533 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 ADOQ96SZ5 270 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 ZNF649Q9BS31 505 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 UBQLN4Q9NRR5 601 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 C2orf42Q9NWW7 574 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 CD300AQ9UGN4 299 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 MYO7AQ13402 2215 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 TRBV11-1A0A0K0K1C0 115 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 A6NIZ1 184 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 KCNK5O95279 499 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 IFNA5P01569 189 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 IL1AP01583 271 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 PYCR1P32322 319 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 RAP1BP61224 184 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 RAP1AP62834 184 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 MICAQ29983 383 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 PRR22Q8IZ63 422 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 L3MBTL4Q8NA19 623 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 ACBD4Q8NC06 268 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 OR5H6Q8NGV6 325 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 PROKR1Q8TCW9 393 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 LKAAEAR1Q8TD35 194 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 DNAJA3Q96EY1 480 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 NIPAL2Q9H841 368 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 DHDHQ9UQ10 334 aa15.16■□□□□ 0.02
USP42-207ENST00000521713 CPNE6O95741 557 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 CTGFP29279 349 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 SOX2P48431 317 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 CSNK2A1P68400 391 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 EMX1Q04741 257 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 MAFAQ8NHW3 353 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 FAM46AQ96IP4 442 aaKnown RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 ATG5Q9H1Y0 275 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 VAPAQ9P0L0 249 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 M0R129 80 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 PPP6CO00743 305 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 SIGLEC6O43699 453 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 GALR3O60755 368 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 GALK2Q01415 458 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 TAGLNQ01995 201 aaKnown RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 RNASE10Q5GAN6 216 aaKnown RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 MANEAQ5SRI9 462 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 ATAD3CQ5T2N8 411 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 LACC1Q8IV20 430 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 DTWD1Q8N5C7 304 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 ZNF709Q8N972 641 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 SLC6A17Q9H1V8 727 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 CLMPQ9H6B4 373 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 DCNP07585 359 aaKnown RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 CD46P15529 392 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 REEP5Q00765 189 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 PTPRRQ15256 657 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 ZNF691Q5VV52 312 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 SLC18B1Q6NT16 456 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 SHFQ7M4L6 423 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 TMPRSS12Q86WS5 348 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 FRS2Q8WU20 508 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 URM1Q9BTM9 101 aaKnown RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 DCAF13Q9NV06 445 aaKnown RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 BOKQ9UMX3 212 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 A3GALT2U3KPV4 340 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 PTPRZ1P23471 2315 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 SLC35F4A4IF30 521 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 IGFBP6P24592 240 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 CRABP1P29762 137 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 TNFRSF17Q02223 184 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 ADIPOR2Q86V24 386 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 OR1E3Q8WZA6 343 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 GTF2H4Q92759 462 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 ZNF300Q96RE9 604 aaPredicted RBP15.15■□□□□ 0.02
USP42-207ENST00000521713 HDHD5Q9BXW7 423 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 KCND3Q9UK17 655 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 CLEC4EQ9ULY5 219 aa15.15■□□□□ 0.02
USP42-207ENST00000521713 TRBV2A0A0J9YWF9 115 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TSTD3H0UI37 97 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 H3BUI4 141 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TRAPPC2P0DI81 140 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TRAPPC2BP0DI82 140 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 MAOAP21397 527 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 CNR2P34972 360 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 SFTPDP35247 375 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 COL9A2Q14055 689 aaPredicted RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 CDK10Q15131 360 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 RPS26P11Q5JNZ5 115 aaPredicted RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 LEG1Q6P5S2 330 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 PXKQ7Z7A4 578 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 SVBPQ8N300 66 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 ELP5Q8TE02 316 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 C6orf106Q9H6K1 298 aaPredicted RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 PADI1Q9ULC6 663 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 M0R3H8 397 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 ARPC5O15511 151 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 MITFO75030 526 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms