RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 IKZF5Q9H5V7 419 aa11.94□□□□□ -0.5
VEGFA-219ENST00000518824 PDZD2O15018 2839 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 MPDZO75970 2070 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 A0A1W2PNR3 127 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 LINC01387J3KSC0 135 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 ADAMDEC1O15204 470 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 ANP32DO95626 131 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 KRT75O95678 551 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 AGR2O95994 175 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 IL18BPO95998 194 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 BCHEP06276 602 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 GUSBP08236 651 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 NR2F1P10589 423 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 NID1P14543 1247 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 RPS4Y1P22090 263 aaKnown RBP11.93□□□□□ -0.5
VEGFA-219ENST00000518824 RYKP34925 604 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 OPRM1P35372 400 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 CRATP43155 626 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 SUMO3P55854 103 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-219ENST00000518824 SESN3P58005 492 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 GUCY1A3Q02108 690 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 LRRC74AQ0VAA2 488 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 GUSBP1Q15486 140 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 SGCBQ16585 318 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 FBXL19-AS1Q494R0 122 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 SLC25A53Q5H9E4 307 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 LRRC74BQ6ZQY2 392 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 MSANTD1Q6ZTZ1 278 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 CHMP1BQ7LBR1 199 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 VRK2Q86Y07 508 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 CNEP1R1Q8N9A8 125 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 OR2V1Q8NHB1 315 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 LINC01560Q8TB33 94 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 SLC38A5Q8WUX1 472 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 ROBO4Q8WZ75 1007 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 RNASE6Q93091 150 aaKnown RBP11.93□□□□□ -0.5
VEGFA-219ENST00000518824 MAL2Q969L2 176 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 DNAJA3Q96EY1 480 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 KLHL15Q96M94 604 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 TRNT1Q96Q11 434 aaKnown RBP11.93□□□□□ -0.5
VEGFA-219ENST00000518824 SFXN3Q9BWM7 321 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-219ENST00000518824 RMND5AQ9H871 391 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 COQ10BQ9H8M1 238 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 RNF122Q9H9V4 155 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 POLE3Q9NRF9 147 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 CRIM1Q9NZV1 1036 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 VAPAQ9P0L0 249 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 CHST2Q9Y4C5 530 aa11.93□□□□□ -0.5
VEGFA-219ENST00000518824 A0A096LPI6 279 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 TRBV5-3A0A0A0MS03 114 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 A0A0G2JND7 137 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 AGAP5A6NIR3 686 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 A8MXE2 369 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 CLIC1O00299 241 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 ETV2O00321 342 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 CGAP01215 116 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 TFPTP0C1Z6 253 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 NCF2P19878 526 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 ATP4BP51164 291 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 DSTNP60981 165 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 RPS3AP61247 264 aaKnown RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 KCNJ10P78508 379 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 CBFBQ13951 182 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 SQLEQ14534 574 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 RGNQ15493 299 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 TMEM176BQ3YBM2 270 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 LRIF1Q5T3J3 769 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF474Q6S9Z5 364 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 EIF3MQ7L2H7 374 aaKnown RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 ZZZ3Q8IYH5 903 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 TOR1AIP2Q8NFQ8 470 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 OSTF1Q92882 214 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 C14orf79Q96F83 325 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 TMEM19Q96HH6 336 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 LURAP1Q96LR2 239 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 ZFP3Q96NJ6 502 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 RBM24Q9BX46 236 aaKnown RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 FGFR1OP2Q9NVK5 253 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 RLIMQ9NVW2 624 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 DNAJB12Q9NXW2 375 aaKnown RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 GALNT8Q9NY28 637 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF175Q9Y473 711 aa11.92□□□□□ -0.5
VEGFA-219ENST00000518824 GPC6Q9Y625 555 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-219ENST00000518824 DSPPQ9NZW4 1301 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 LRBAP50851 2863 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 IGHV3-15A0A0B4J1V0 119 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 SMNDC1O75940 238 aaKnown RBP eCLIP11.91□□□□□ -0.54e-7■■□□□ 12.8
VEGFA-219ENST00000518824 ADH6P28332 368 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 EIF1P41567 113 aaKnown RBP11.91□□□□□ -0.5
VEGFA-219ENST00000518824 EEFSECP57772 596 aaKnown RBP11.91□□□□□ -0.5
VEGFA-219ENST00000518824 HPCAP84074 193 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 FAM27E3Q08E93 113 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 MYBPHQ13203 477 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 MRPL2Q5T653 305 aaKnown RBP11.91□□□□□ -0.5
VEGFA-219ENST00000518824 DLEU7Q6UYE1 221 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF836Q6ZNA1 936 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 ESPNLQ6ZVH7 1005 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 PLEKHM3Q6ZWE6 761 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms