RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 KIAA0513O60268 411 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 EIF4E2O60573 245 aaKnown RBP10.3□□□□□ -0.76
VCAN-212ENST00000515397 SOX30O94993 753 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 ANP32DO95626 131 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 IL6P05231 212 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 NR2F1P10589 423 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 ZNF17P17021 662 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 CCNA2P20248 432 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 ME2P23368 584 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 CRATP43155 626 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 SESN3P58005 492 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 PLAURQ03405 335 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 POU4F3Q15319 338 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 FBXL19-AS1Q494R0 122 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 C6orf10Q5SRN2 563 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 ANKRD34AQ69YU3 496 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 FUNDC1Q8IVP5 155 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 TRIML2Q8N7C3 387 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 TOR1AIP2Q8NFQ8 470 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 ZFP90Q8TF47 636 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 CKAP2Q8WWK9 683 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 CNOT9Q92600 299 aaKnown RBP10.3□□□□□ -0.76
VCAN-212ENST00000515397 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
VCAN-212ENST00000515397 KLHL15Q96M94 604 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 SRXN1Q9BYN0 137 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 LAT2Q9GZY6 243 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 SLC38A1Q9H2H9 487 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 RNF122Q9H9V4 155 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 DNAJB12Q9NXW2 375 aaKnown RBP10.3□□□□□ -0.76
VCAN-212ENST00000515397 SLAMF8Q9P0V8 285 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 PACSIN3Q9UKS6 424 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 OTOGQ6ZRI0 2925 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 C7orf72A4D263 438 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 NR5A2O00482 541 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 ADAMDEC1O15204 470 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 POLR3GO15318 223 aaPredicted RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 ADAM11O75078 769 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 CTAG2O75638 210 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 SYNGR4O95473 234 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 AK1P00568 194 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 NUDT7P0C024 238 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 PGM1P36871 562 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 KCNJ5P48544 419 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 MVDP53602 400 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 MERTKQ12866 999 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 SKP2Q13309 424 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 CBFBQ13951 182 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 MAPK11Q15759 364 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 RPS26P11Q5JNZ5 115 aaPredicted RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 OR2A2Q6IF42 318 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 EIF3MQ7L2H7 374 aaKnown RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 KIF18BQ86Y91 864 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 ZNF619Q8N2I2 560 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 GTF2H4Q92759 462 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 LRRC46Q96FV0 321 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 ITCHQ96J02 903 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 ZFP3Q96NJ6 502 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 PAIP1Q9H074 479 aaKnown RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 SAP130Q9H0E3 1048 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 C12orf49Q9H741 205 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 VIPAS39Q9H9C1 493 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 TPT1P8Q9HAU6 139 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 RLIMQ9NVW2 624 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 ZNF446Q9NWS9 450 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 CCDC167Q9P0B6 97 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 STOML1Q9UBI4 398 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 DCTN4Q9UJW0 460 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 PCDHB14Q9Y5E9 798 aa10.29□□□□□ -0.76
VCAN-212ENST00000515397 GPC6Q9Y625 555 aaPredicted RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 ANKRD17O75179 2603 aaKnown RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 MAP1AP78559 2803 aaPredicted RBP10.29□□□□□ -0.76
VCAN-212ENST00000515397 PRR14LQ5THK1 2151 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 FAM234BA2RU67 622 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 A6NNC1 897 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 AP3D1O14617 1153 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 TGDSO95455 350 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 KRT75O95678 551 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 AGR2O95994 175 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 PLGP00747 810 aaPredicted RBP10.28□□□□□ -0.76
VCAN-212ENST00000515397 CGAP01215 116 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 EPXP11678 715 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 NCF2P19878 526 aaPredicted RBP10.28□□□□□ -0.76
VCAN-212ENST00000515397 ENPP1P22413 925 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 EIF1P41567 113 aaKnown RBP10.28□□□□□ -0.76
VCAN-212ENST00000515397 CTBP2P56545 445 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 KCNJ10P78508 379 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 HPCAP84074 193 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 FGFBP1Q14512 234 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 AGKQ53H12 422 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 PAGE3Q5JUK9 113 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 FBXW10Q5XX13 1052 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 C22orf34Q6ZV56 151 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 ESPNLQ6ZVH7 1005 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 FAM214BQ7L5A3 538 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 ZNF550Q7Z398 422 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 CDH24Q86UP0 819 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 VRK2Q86Y07 508 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 ZNF563Q8TA94 476 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 ABHD3Q8WU67 409 aa10.28□□□□□ -0.76
VCAN-212ENST00000515397 MAL2Q969L2 176 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms