RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CHMP1BQ7LBR1 199 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 PIGWQ7Z7B1 504 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 TREML1Q86YW5 311 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
USP46-209ENST00000514536 MEIOBQ8N635 442 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 METTL25Q8N6Q8 603 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 PCYOX1LQ8NBM8 494 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 FAM71CQ8NEG0 241 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 BBS10Q8TAM1 723 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 MYLK2Q9H1R3 596 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 TMEM38AQ9H6F2 299 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 CALHM2Q9HA72 323 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 RLIMQ9NVW2 624 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 GID8Q9NWU2 228 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 COQ3Q9NZJ6 369 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 RNF6Q9Y252 685 aa12.59□□□□□ -0.39
USP46-209ENST00000514536 GPC6Q9Y625 555 aaPredicted RBP12.59□□□□□ -0.39
USP46-209ENST00000514536 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 CLCA1A8K7I4 914 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 FXYD1O00168 92 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 EFNA2O43921 213 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 DNAJA2O60884 412 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 TOXO94900 526 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 CLDN1O95832 211 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 NPPAP01160 153 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 PRKCAP17252 672 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 PGCP20142 388 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 IL11P20809 199 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 SLC6A2P23975 617 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 SCARB2Q14108 478 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 LARS2Q15031 903 aaKnown RBP12.58□□□□□ -0.4
USP46-209ENST00000514536 CDSNQ15517 529 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 CYP51A1Q16850 503 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 LIN52Q52LA3 116 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 MRPL2Q5T653 305 aaKnown RBP12.58□□□□□ -0.4
USP46-209ENST00000514536 ZNF836Q6ZNA1 936 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 PTOV1Q86YD1 416 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 ATP6V1C2Q8NEY4 427 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 OR10A6Q8NH74 314 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 RCN3Q96D15 328 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 CCT8L2Q96SF2 557 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 TMEM185BQ9H7F4 350 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 KAT8Q9H7Z6 458 aaKnown RBP12.58□□□□□ -0.4
USP46-209ENST00000514536 CACYBPQ9HB71 228 aaKnown RBP12.58□□□□□ -0.4
USP46-209ENST00000514536 DNAJB12Q9NXW2 375 aaKnown RBP12.58□□□□□ -0.4
USP46-209ENST00000514536 STOML1Q9UBI4 398 aa12.58□□□□□ -0.4
USP46-209ENST00000514536 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
USP46-209ENST00000514536 A0A0G2JNJ9 132 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 CD8B2A6NJW9 211 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 AIM2O14862 343 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 ADAM11O75078 769 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 ETS2P15036 469 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 AGAP20933 346 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 ADH6P28332 368 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 EEFSECP57772 596 aaKnown RBP12.57□□□□□ -0.4
USP46-209ENST00000514536 SESN3P58005 492 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 RAC1P63000 192 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 RABL3Q5HYI8 236 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 ZNF311Q5JNZ3 666 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 LACC1Q8IV20 430 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 LILRA2Q8N149 483 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 TNIP2Q8NFZ5 429 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 ZNF563Q8TA94 476 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 MRGPRX4Q96LA9 322 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 SH3GL1Q99961 368 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 PIF1Q9H611 641 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
USP46-209ENST00000514536 Q9UFV3 132 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 ARL2BPQ9Y2Y0 163 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 IFT52Q9Y366 437 aa12.57□□□□□ -0.4
USP46-209ENST00000514536 CDHR4A6H8M9 788 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 EIF1AYO14602 144 aaKnown RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 AP3D1O14617 1153 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 NTN1O95631 604 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 IL2RAP01589 272 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 THBS1P07996 1170 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 ME2P23368 584 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 AQP1P29972 269 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 TIMP3P35625 211 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 SLC6A8P48029 635 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 IDH2P48735 452 aaKnown RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 EEF1A1P68104 462 aaKnown RBP12.56□□□□□ -0.4
USP46-209ENST00000514536 SLC25A53Q5H9E4 307 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 RIPPLY2Q5TAB7 128 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ADGRE4PQ86SQ3 457 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 GGNQ86UU5 652 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ZZZ3Q8IYH5 903 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 C11orf65Q8NCR3 313 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 OR8J3Q8NGG0 315 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 CA5BP1Q8WTZ4 195 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ASB5Q8WWX0 329 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 TMEM234Q8WY98 164 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ST8SIA1Q92185 356 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ECSITQ9BQ95 431 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 SPATA9Q9BWV2 254 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ACER3Q9NUN7 267 aa12.56□□□□□ -0.4
USP46-209ENST00000514536 ADAM21Q9UKJ8 722 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms