RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FAM71CQ8NEG0 241 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 VPS37AQ8NEZ2 397 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 ZFP90Q8TF47 636 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 OSTF1Q92882 214 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 TEX37Q96LM6 180 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 PAIP2Q9BPZ3 127 aaKnown RBP9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 LAT2Q9GZY6 243 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 TIGARQ9NQ88 270 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 POLE3Q9NRF9 147 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 EXD2Q9NVH0 621 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 AIG1Q9NVV5 245 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 BTNL2Q9UIR0 455 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 MKLN1Q9UL63 735 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 PCDHGB4Q9UN71 923 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 SPG11Q96JI7 2443 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 UQCRHLA0A096LP55 91 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 HDAC3O15379 428 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 THBDP07204 575 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 PABPC4LP0CB38 370 aaKnown RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 OR12D1P0DN82 309 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 CD99P14209 185 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 PPP3CBP16298 524 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 KLK2P20151 261 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 IL12AP29459 219 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 CCR4P51679 360 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 CASP9P55211 416 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 CARD18P57730 90 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 FOXD4Q12950 439 aaPredicted RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 RNPS1Q15287 305 aaKnown RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 MAPK14Q16539 360 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 EXOC3L2Q2M3D2 409 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 TYW3Q6IPR3 259 aaKnown RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 C3orf33Q6P1S2 294 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 TNFAIP8L2Q6P589 184 aaPredicted RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 STAC2Q6ZMT1 411 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 FRRS1Q6ZNA5 592 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 EIF3MQ7L2H7 374 aaKnown RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 SPATA19Q7Z5L4 167 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 RFWD2Q8NHY2 731 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 RAB3IL1Q8TBN0 382 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 ABHD3Q8WU67 409 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 ROBO4Q8WZ75 1007 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 ST8SIA1Q92185 356 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 PIK3IP1Q96FE7 263 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC35A5Q9BS91 424 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 KLHL4Q9C0H6 718 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 SAP130Q9H0E3 1048 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 OR10A4Q9H209 315 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 GP6Q9HCN6 339 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 DLL4Q9NR61 685 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 THAP1Q9NVV9 213 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 BEX4Q9NWD9 120 aaPredicted RBP9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 KLHL13Q9P2N7 655 aa9.33□□□□□ -0.92
HMGXB3-205ENST00000514469 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 PRAMEF27A3QJZ7 478 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 TRPC5OSA6NMA1 111 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 C9JVG2 144 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 HMGN4O00479 90 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 H6PDO95479 791 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 CPSF4O95639 269 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 CSTAP01040 98 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 PSMB1P20618 241 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 EPHA3P29320 983 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 S100A3P33764 101 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 PGM1P36871 562 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 NME5P56597 212 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 UFM1P61960 85 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 PPP2R2AP63151 447 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 ADAM8P78325 824 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 PLAURQ03405 335 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 LRRC74AQ0VAA2 488 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 TMEM176BQ3YBM2 270 aaPredicted RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 ATAD3BQ5T9A4 648 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 GTF2IRD2BQ6EKJ0 949 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 TFAP2EQ6VUC0 442 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 BEND4Q6ZU67 534 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 FCRLAQ7L513 359 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 GTF2IRD2Q86UP8 949 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 STK32CQ86UX6 486 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 CXorf67Q86X51 503 aaPredicted RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 MGARPQ8TDB4 240 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 XAGE5Q8WWM1 108 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 RAB8BQ92930 207 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 ROPN1LQ96C74 230 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 TLCD1Q96CP7 247 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 ZC3HAV1LQ96H79 300 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 REXO5Q96IC2 774 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 MAELQ96JY0 434 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 HS3ST6Q96QI5 342 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 THUMPD3Q9BV44 507 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 C12orf49Q9H741 205 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 FANCFQ9NPI8 374 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 MARCOQ9UEW3 520 aaPredicted RBP9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC35A3Q9Y2D2 325 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 WDR45Q9Y484 360 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 GPR45Q9Y5Y3 372 aa9.32□□□□□ -0.92
HMGXB3-205ENST00000514469 PCNX3Q9H6A9 2034 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 GOLGA8QA0A0J9YX86 632 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 A0A1W2PNR3 127 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms