RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	CNTN2	Q02246	1040 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	BCL2L1	Q07817	233 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	FUT7	Q11130	342 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	PLD1	Q13393	1074 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	KCNJ11	Q14654	390 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	HERPUD1	Q15011	391 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	PARP6	Q2NL67	630 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	PP632	Q6XCG6	107 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	FRA10AC1	Q70Z53	315 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	GOLGA7	Q7Z5G4	137 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	CENPS	Q8N2Z9	138 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	LRRC17	Q8N6Y2	441 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	ZNF397	Q8NF99	534 aa	Predicted RBP	2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	OR10H4	Q8NGA5	316 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	AKR7L	Q8NHP1	331 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	ANKRD49	Q8WVL7	239 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	SRSF12	Q8WXF0	261 aa	Known RBP	2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	MCHR2	Q969V1	340 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	MARC2	Q969Z3	335 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	C4orf36	Q96KX1	117 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	GPA33	Q99795	319 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	NDUFAF3	Q9BU61	184 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	FTHL17	Q9BXU8	183 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	GPR61	Q9BZJ8	451 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	CHMP4B	Q9H444	224 aa	Known RBP	2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	YY1AP1	Q9H869	796 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	FAM114A2	Q9NRY5	505 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	HOXC10	Q9NYD6	342 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	PCSK1N	Q9UHG2	260 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	KLK12	Q9UKR0	248 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	EXOSC1	Q9Y3B2	195 aa	Known RBP	2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	L3MBTL1	Q9Y468	752 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	FKBP7	Q9Y680	259 aa		2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	DDX49	Q9Y6V7	483 aa	Known RBP	2.59	□□□□□ -1.99
MATR3-223	ENST00000514402	ZMYM6	O95789	1325 aa		2.59	□□□□□ -2
MATR3-223	ENST00000514402	LRRK1	Q38SD2	2015 aa		2.59	□□□□□ -2
MATR3-223	ENST00000514402	PTCH1	Q13635	1447 aa		2.59	□□□□□ -2
MATR3-223	ENST00000514402	NACA	E9PAV3	2078 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	TM9SF1	O15321	606 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	TBL1X	O60907	577 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	OR4F21	O95013	312 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	MFN2	O95140	757 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	CA3	P07451	260 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	IGFBP1	P08833	259 aa	Predicted RBP	2.58	□□□□□ -2
MATR3-223	ENST00000514402	ALOX5	P09917	674 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	SLC35G4	P0C7Q5	338 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	RRAS	P10301	218 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	GAL	P22466	123 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	CALB2	P22676	271 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	PTBP1	P26599	531 aa	Known RBP eCLIP	2.58	□□□□□ -2
MATR3-223	ENST00000514402	PRDX2	P32119	198 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	DLST	P36957	453 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	SLC6A8	P48029	635 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	EMD	P50402	254 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	PRRX1	P54821	245 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	ACTR3	P61158	418 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	HERVK_113	P63132	956 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	ERVK-8	P63133	956 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	NUCB2	P80303	420 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	IDI1	Q13907	227 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	ZSWIM7	Q19AV6	140 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	C1orf185	Q5T7R7	199 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	AGBL2	Q5U5Z8	902 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	ZNF57	Q68EA5	555 aa	Predicted RBP	2.58	□□□□□ -2
MATR3-223	ENST00000514402	FAM159A	Q6UWV7	190 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	TTC5	Q8N0Z6	440 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	CCDC148	Q8NFR7	591 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	OR8J1	Q8NGP2	316 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	TMEM80	Q96HE8	168 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	TPD52L3	Q96J77	140 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	IL4I1	Q96RQ9	567 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	ERVK-6	Q9BXR3	956 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	MRPL13	Q9BYD1	178 aa	Known RBP	2.58	□□□□□ -2
MATR3-223	ENST00000514402	PTGES2	Q9H7Z7	377 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	WDR76	Q9H967	626 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	HYPK	Q9NX55	129 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	DUS2	Q9NX74	493 aa	Known RBP	2.58	□□□□□ -2
MATR3-223	ENST00000514402	RDH8	Q9NYR8	311 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	GALP	Q9UBC7	116 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	FZR1	Q9UM11	496 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	ASTN1	O14525	1302 aa		2.58	□□□□□ -2
MATR3-223	ENST00000514402	GSAP	A4D1B5	854 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	NCF1B	A6NI72	391 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	ZNF716	A6NP11	495 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	NCF1C	A8MVU1	366 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402		E9PLD3	99 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402		H0YIV9	168 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	LGALS8	O00214	317 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	PRRG1	O14668	218 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	MED7	O43513	233 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	B4GALT2	O60909	372 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	SNN	O75324	88 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	GPX5	O75715	221 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CIB2	O75838	187 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	SERPINA3	P01011	423 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CD55	P08174	381 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	ZNF735	P0CB33	412 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CCNE1	P24864	410 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CDH5	P33151	784 aa	Predicted RBP	2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms