RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 TRIM8Q9BZR9 551 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 IKZF5Q9H5V7 419 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 CCDC134Q9H6E4 229 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 MTHFD2LQ9H903 347 aaPredicted RBP12.57□□□□□ -0.4
DDX41-212ENST00000511040 TMEM45AQ9NWC5 275 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 HCFC1P51610 2035 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 A0A0J9YW62 118 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 EEF1E1O43324 174 aaKnown RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 CXCL13O43927 109 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 RCBTB2O95199 551 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 ME2P23368 584 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 UQCRC1P31930 480 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 MAGEA8P43361 318 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 SESN3P58005 492 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 RPS3AP61247 264 aaKnown RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 RAC1P63000 192 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 CTU2Q2VPK5 515 aaKnown RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 METTL21CQ5VZV1 264 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 VRK2Q86Y07 508 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 METTL25Q8N6Q8 603 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 FAM71CQ8NEG0 241 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 OR52P1PQ8NH57 321 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 OR10D3Q8NH80 312 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 OR2V1Q8NHB1 315 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 TMEM19Q96HH6 336 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 TREX2Q9BQ50 279 aaPredicted RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 RAD21L1Q9H4I0 556 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 STOML1Q9UBI4 398 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 ZNF629Q9UEG4 869 aaPredicted RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 LEF1Q9UJU2 399 aaPredicted RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 GPC6Q9Y625 555 aaPredicted RBP12.56□□□□□ -0.4
DDX41-212ENST00000511040 MED12LQ86YW9 2145 aa12.56□□□□□ -0.4
DDX41-212ENST00000511040 CRYBG3Q68DQ2 2970 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 CACNA1DQ01668 2161 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 INTS1Q8N201 2190 aaKnown RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 TRBV5-3A0A0A0MS03 114 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 AP3D1O14617 1153 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 ANGPT2O15123 496 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 ADAM11O75078 769 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 AQP8O94778 261 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 NTN1O95631 604 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 IL7RP16871 459 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 PGCP20142 388 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 RPS4Y1P22090 263 aaKnown RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 OPRM1P35372 400 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 CRISP3P54108 245 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 DLX5P56178 289 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 SIRPAP78324 504 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 TMEM176BQ3YBM2 270 aaPredicted RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 GCNT6Q5T4J0 391 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 MRPL2Q5T653 305 aaKnown RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 AP1ARQ63HQ0 302 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 HBMQ6B0K9 141 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 DHDDSQ86SQ9 333 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 PEX5LQ8IYB4 626 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 ADGRG7Q96K78 797 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 MRGPRX4Q96LA9 322 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 KLHL15Q96M94 604 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 ZNF317Q96PQ6 595 aaPredicted RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 CPPED1Q9BRF8 314 aaPredicted RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 A4GALTQ9NPC4 353 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 RLIMQ9NVW2 624 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 DNAJB12Q9NXW2 375 aaKnown RBP12.55□□□□□ -0.4
DDX41-212ENST00000511040 CALML5Q9NZT1 146 aa12.55□□□□□ -0.4
DDX41-212ENST00000511040 A0A1W2PNV4 684 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 TMEM247A6NEH6 219 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 C5orf58C9J3I9 102 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ADAMDEC1O15204 470 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 DNAJA2O60884 412 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 DBIP07108 87 aaKnown RBP12.54□□□□□ -0.4
DDX41-212ENST00000511040 NID1P14543 1247 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ELK4P28324 431 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ADH6P28332 368 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ASCL1P50553 236 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 MERTKQ12866 999 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 KLF10Q13118 480 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 FADDQ13158 208 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 NFYCQ13952 458 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 SELPLGQ14242 412 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 CAPRIN1Q14444 709 aaKnown RBP12.54□□□□□ -0.4
DDX41-212ENST00000511040 SLC25A53Q5H9E4 307 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ZNF836Q6ZNA1 936 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ESPNLQ6ZVH7 1005 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 LUZP2Q86TE4 346 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 NFKBIDQ8NI38 313 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 OIT3Q8WWZ8 545 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 OSTF1Q92882 214 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 SPOCK3Q9BQ16 436 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 SFXN3Q9BWM7 321 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms