RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 TRAM2Q15035 370 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 RAB30Q15771 203 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 HYAL4Q2M3T9 481 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 PUS10Q3MIT2 529 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 GLYR1Q49A26 553 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 MINDY4Q4G0A6 757 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CRTC2Q53ET0 693 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 FAM27D1Q5T7N8 215 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 NXNL2Q5VZ03 156 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TYW3Q6IPR3 259 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 XKRXQ6PP77 449 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 NPSR1Q6W5P4 371 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 RPTNQ6XPR3 784 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ZNF730Q6ZMV8 503 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ZNF836Q6ZNA1 936 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 RRM2BQ7LG56 351 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 MRGPREQ86SM8 312 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 LHFPL3Q86UP9 236 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 GJD3Q8N144 294 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ARHGEF39Q8N4T4 335 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ZNF655Q8N720 491 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 FAM181AQ8N9Y4 354 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 MFSD9Q8NBP5 474 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ANKK1Q8NFD2 765 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 MAFAQ8NHW3 353 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TM9SF4Q92544 642 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 AP3S1Q92572 193 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CNOT9Q92600 299 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 GUCD1Q96NT3 240 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CDX2Q99626 313 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TM9SF2Q99805 663 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ARHGDIGQ99819 225 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 NUDT22Q9BRQ3 303 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 MED18Q9BUE0 208 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 RAB11FIP5Q9BXF6 653 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 PRRG3Q9BZD7 231 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 DPH1Q9BZG8 443 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 PPIL3Q9H2H8 161 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 MIXL1Q9H2W2 232 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 PRO3102Q9H379 93 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TOR4AQ9NXH8 423 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SLC7A7Q9UM01 511 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 EXOSC1Q9Y3B2 195 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CNOT1A5YKK6 2376 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 FAM186AA6NE01 2351 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 A0A1B0GVT2 93 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 KDM4EB2RXH2 506 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SHISA8B8ZZ34 492 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SERPINI2O75830 405 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CBX7O95931 251 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CCNYL3P0C7X3 344 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ZNF16P17020 682 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 GABRA5P31644 462 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 IFNA8P32881 189 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SDC2P34741 201 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 AHRP35869 848 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 NR0B1P51843 470 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ABATP80404 500 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 DAB2P98082 770 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 IFITM2Q01629 132 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TGM3Q08188 693 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ST3GAL3Q11203 375 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TPBGQ13641 420 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 INPP5JQ15735 1006 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TAB1Q15750 504 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ATAD3CQ5T2N8 411 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 PDZK1Q5T2W1 519 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 DDI2Q5TDH0 399 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CBLN3Q6UW01 205 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 QSOX2Q6ZRP7 698 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 RASSF6Q6ZTQ3 369 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 LANCL3Q6ZV70 420 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 NRMQ8IXM6 262 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SLC7A5P1Q8MH63 180 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 UBE2J2Q8N2K1 259 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CSNK1A1LQ8N752 337 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ZSCAN1Q8NBB4 408 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 OR52R1Q8NGF1 315 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 OR5M3Q8NGP4 307 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 OR6F1Q8NGZ6 308 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 CEP76Q8TAP6 659 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TM4SF19Q96DZ7 209 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 DIRAS2Q96HU8 199 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 YIPF2Q9BWQ6 316 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SLC22A4Q9H015 551 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TP63Q9H3D4 680 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 TRIM45Q9H8W5 580 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 ISG20L2Q9H9L3 353 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 GIMAP4Q9NUV9 329 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 GSTK1Q9Y2Q3 226 aa4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SF3B6Q9Y3B4 125 aaKnown RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 SIRT4Q9Y6E7 314 aaPredicted RBP4.25□□□□□ -1.73
ATP2C1-212ENST00000507488 A0A1W2PPK0 400 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 ANKRD61A6NGH8 418 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 IDSB3KWA1 339 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 CHST10O43529 356 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 IDH3BO43837 385 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 TMCC2O75069 709 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 GIMD1P0DJR0 217 aa4.24□□□□□ -1.73
ATP2C1-212ENST00000507488 SMIM10L1P0DMW3 83 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms