RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 EGFEM1PQ0D2K5 195 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 C1orf61Q13536 156 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 KRT71Q3SY84 523 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 CCDC152Q4G0S7 254 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 TP53I3Q53FA7 332 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 PAGE2BQ5JRK9 111 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 C10orf120Q5SQS8 335 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ZNF544Q6NX49 715 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 KCNIP4Q6PIL6 250 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 FRA10AC1Q70Z53 315 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 TRPM8Q7Z2W7 1104 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 C16orf62Q7Z3J2 963 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ACOT1Q86TX2 421 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 VASH2Q86V25 355 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ZNF584Q8IVC4 421 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 SKA3Q8IX90 412 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 OR1F12Q8NHA8 337 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 PAQR8Q8TEZ7 354 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 SH3YL1Q96HL8 342 aaPredicted RBP2.47□□□□□ -2.01
LSM6-205ENST00000507449 SENP8Q96LD8 212 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ZNF184Q99676 751 aaPredicted RBP2.47□□□□□ -2.01
LSM6-205ENST00000507449 EDEM2Q9BV94 578 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 CRNKL1Q9BZJ0 848 aaKnown RBP2.47□□□□□ -2.01
LSM6-205ENST00000507449 GORASP2Q9H8Y8 452 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 SMPD3Q9NY59 655 aaPredicted RBP2.47□□□□□ -2.01
LSM6-205ENST00000507449 RNF14Q9UBS8 474 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 SNX6Q9UNH7 406 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 MAB21L2Q9Y586 359 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ALG6Q9Y672 507 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 KIF25-AS1Q9Y6Z4 181 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 IGHV1OR15-1A0A075B7D0 117 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 TUBAL3A6NHL2 446 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 EPOPA6NHQ4 379 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 ARPC3O15145 178 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 MAGEB3O15480 346 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 SERF1AO75920 110 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 GCKP35557 465 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 KIR2DS2P43631 304 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 OR3A4PP47883 348 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 OC90Q02509 493 aaPredicted RBP2.46□□□□□ -2.02
LSM6-205ENST00000507449 BCL2L1Q07817 233 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 AANATQ16613 207 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 ISXQ2M1V0 245 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 SLC25A52Q3SY17 297 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 ZNF658Q5TYW1 1059 aaPredicted RBP2.46□□□□□ -2.02
LSM6-205ENST00000507449 ATF7IP2Q5U623 682 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 LIPNQ5VXI9 398 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 OLFML2AQ68BL7 652 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 MOB1BQ7L9L4 216 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 PPP1R42Q7Z4L9 355 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 TBC1D21Q8IYX1 336 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 ZNF683Q8IZ20 524 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 TMEM123Q8N131 208 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 CADM2Q8N3J6 435 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 STEAP2Q8NFT2 490 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 STXBP6Q8NFX7 210 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 OR10A7Q8NGE5 316 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 OR4D9Q8NGE8 314 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 OR4D5Q8NGN0 318 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 PIGCQ92535 297 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 EMG1Q92979 244 aaKnown RBP2.46□□□□□ -2.02
LSM6-205ENST00000507449 PLEKHF1Q96S99 279 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 ZNF670Q9BS34 389 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 NXF5Q9H1B4 397 aaKnown RBP2.46□□□□□ -2.02
LSM6-205ENST00000507449 FANCFQ9NPI8 374 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 SLC17A5Q9NRA2 495 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 IL36GQ9NZH8 169 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 PIPOXQ9P0Z9 390 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 PCSK1NQ9UHG2 260 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 ERVW-1Q9UQF0 538 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 MEMO1Q9Y316 297 aa2.46□□□□□ -2.02
LSM6-205ENST00000507449 AK6Q9Y3D8 172 aaKnown RBP2.46□□□□□ -2.02
LSM6-205ENST00000507449 LRP5LA4QPB2 252 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 METTL21EPA6NDL7 271 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 E7ENQ6 273 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 NPIPA7E9PJI5 369 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 K7N7A8 449 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SULT2B1O00204 365 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 TNFSF11O14788 317 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 RS1O15537 224 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 PRKYO43930 277 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 GMFGO60234 142 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SEMG1P04279 462 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 OR8U8P0C7N1 319 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 NPIPA8P0DM63 369 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 AQP1P29972 269 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 PRKXP51817 358 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 DIO3P55073 304 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SPIBQ01892 262 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 ELAVL3Q14576 367 aaKnown RBP2.45□□□□□ -2.02
LSM6-205ENST00000507449 TPD52L1Q16890 204 aaPredicted RBP2.45□□□□□ -2.02
LSM6-205ENST00000507449 LRRC36Q1X8D7 754 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 ATAD3BQ5T9A4 648 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 METTL11BQ5VVY1 283 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 MOB3BQ86TA1 216 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 TPRA1Q86W33 373 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 CLEC4FQ8N1N0 589 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SYT14Q8NB59 555 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 OR10H4Q8NGA5 316 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms