RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 SUMO3P55854 103 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 WDR4P57081 412 aaKnown RBP12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 NKX6-1P78426 367 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 BST1Q10588 318 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 CASP8Q14790 479 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 QPRTQ15274 297 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZNF239Q16600 458 aaKnown RBP12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 TUSC5Q8IXB3 177 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZNF614Q8N883 585 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 MIPOL1Q8TD10 442 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 RAB8BQ92930 207 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 THUMPD3Q9BV44 507 aaKnown RBP12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 NMUR2Q9GZQ4 415 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 OR51I1Q9H343 314 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 C12orf49Q9H741 205 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 COQ10BQ9H8M1 238 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 PRR14LQ5THK1 2151 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 A0A1W2PNR3 127 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 STX11O75558 287 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 PLAUP00749 431 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 ALDOCP09972 364 aaKnown RBP12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 FOSL1P15407 271 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 LBPP18428 481 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 UQCRC2P22695 453 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 ELK4P28324 431 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 IL12AP29459 219 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 NME5P56597 212 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 UFM1P61960 85 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 FUT5Q11128 374 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 SKP2Q13309 424 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 GTF2IRD2BQ6EKJ0 949 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 BEND4Q6ZU67 534 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 GTF2IRD2Q86UP8 949 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 LSRQ86X29 649 aaPredicted RBP12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 RNF128Q8TEB7 428 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 TESCQ96BS2 214 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 SLC35G5Q96KT7 338 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 MRGPRX4Q96LA9 322 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 SMR3AQ99954 134 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 PAIP2Q9BPZ3 127 aaKnown RBP12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZNF350Q9GZX5 532 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 QRSL1Q9H0R6 528 aaKnown RBP12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 MEAF6Q9HAF1 191 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
CDC42SE2-209ENST00000506419 DNHD1Q96M86 4753 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 IGHV3-15A0A0B4J1V0 119 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 C9JVG2 144 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 SDHDO14521 159 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 GCM2O75603 506 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 CYP7B1O75881 506 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 PRKD3O94806 890 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 H6PDO95479 791 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 UBL4AP11441 157 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 HOXB4P17483 251 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 SESN3P58005 492 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 TIGD2Q4W5G0 525 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 SAXO2Q658L1 398 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 TYW3Q6IPR3 259 aaKnown RBP12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 TNFAIP8L2Q6P589 184 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 FCRLAQ7L513 359 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 HMGN2P46Q86SG4 172 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 GABRG1Q8N1C3 465 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 TOR1AIP2Q8NFQ8 470 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZFP90Q8TF47 636 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 CPNE4Q96A23 557 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZNF775Q96BV0 537 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 POM121Q96HA1 1249 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 PIP5K1AQ99755 562 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 SAP130Q9H0E3 1048 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 TIGARQ9NQ88 270 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 GPR52Q9Y2T5 361 aa12.81□□□□□ -0.36
CDC42SE2-209ENST00000506419 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 AK1P00568 194 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 YES1P07947 543 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 GUSBP08236 651 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 PABPC4LP0CB38 370 aaKnown RBP12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 UBTFL6P0CB48 400 aaPredicted RBP12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 PPP3CBP16298 524 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 PSMB1P20618 241 aaKnown RBP12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 EDNRAP25101 427 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 PGM1P36871 562 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 RAC3P60763 192 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 PLAURQ03405 335 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 CHRNEQ04844 493 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 CBFBQ13951 182 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 RNPS1Q15287 305 aaKnown RBP12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 FRRS1Q6ZNA5 592 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 LRRC34Q8IZ02 419 aa12.8□□□□□ -0.36
CDC42SE2-209ENST00000506419 ANKRD42Q8N9B4 389 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms