RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ESPNLQ6ZVH7 1005 aa15.04■□□□□ -0
SNCA-209ENST00000506244 ZNF440Q8IYI8 595 aa15.04■□□□□ -0
SNCA-209ENST00000506244 FBXO27Q8NI29 283 aa15.04■□□□□ -0
SNCA-209ENST00000506244 C10orf82Q8WW14 230 aa15.04■□□□□ -0
SNCA-209ENST00000506244 THUMPD3Q9BV44 507 aaKnown RBP15.04■□□□□ -0
SNCA-209ENST00000506244 QRSL1Q9H0R6 528 aaKnown RBP15.04■□□□□ -0
SNCA-209ENST00000506244 SAR1AQ9NR31 198 aa15.04■□□□□ -0
SNCA-209ENST00000506244 SLAMF8Q9P0V8 285 aa15.04■□□□□ -0
SNCA-209ENST00000506244 PRDM4Q9UKN5 801 aa15.04■□□□□ -0
SNCA-209ENST00000506244 CAPN7Q9Y6W3 813 aa15.04■□□□□ -0
SNCA-209ENST00000506244 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.03■□□□□ -0
SNCA-209ENST00000506244 EIF1AYO14602 144 aaKnown RBP15.03■□□□□ -0
SNCA-209ENST00000506244 DNAJA2O60884 412 aa15.03■□□□□ -0
SNCA-209ENST00000506244 TOXO94900 526 aa15.03■□□□□ -0
SNCA-209ENST00000506244 IL18BPO95998 194 aa15.03■□□□□ -0
SNCA-209ENST00000506244 THBS1P07996 1170 aa15.03■□□□□ -0
SNCA-209ENST00000506244 TMIGD3P0DMS9 266 aaPredicted RBP15.03■□□□□ -0
SNCA-209ENST00000506244 ARAFP10398 606 aa15.03■□□□□ -0
SNCA-209ENST00000506244 CTSSP25774 331 aa15.03■□□□□ -0
SNCA-209ENST00000506244 OPRM1P35372 400 aa15.03■□□□□ -0
SNCA-209ENST00000506244 CLDN20P56880 219 aa15.03■□□□□ -0
SNCA-209ENST00000506244 CDSNQ15517 529 aa15.03■□□□□ -0
SNCA-209ENST00000506244 SGCBQ16585 318 aa15.03■□□□□ -0
SNCA-209ENST00000506244 TRMT5Q32P41 509 aaKnown RBP15.03■□□□□ -0
SNCA-209ENST00000506244 MMEL1Q495T6 779 aa15.03■□□□□ -0
SNCA-209ENST00000506244 RNF220Q5VTB9 566 aa15.03■□□□□ -0
SNCA-209ENST00000506244 C3orf33Q6P1S2 294 aa15.03■□□□□ -0
SNCA-209ENST00000506244 DLEU7Q6UYE1 221 aa15.03■□□□□ -0
SNCA-209ENST00000506244 GGNQ86UU5 652 aa15.03■□□□□ -0
SNCA-209ENST00000506244 C9orf106Q8NAJ2 232 aa15.03■□□□□ -0
SNCA-209ENST00000506244 ZNF563Q8TA94 476 aa15.03■□□□□ -0
SNCA-209ENST00000506244 POC1BQ8TC44 478 aa15.03■□□□□ -0
SNCA-209ENST00000506244 KLHL15Q96M94 604 aa15.03■□□□□ -0
SNCA-209ENST00000506244 CGREF1Q99674 301 aa15.03■□□□□ -0
SNCA-209ENST00000506244 CPPED1Q9BRF8 314 aaPredicted RBP15.03■□□□□ -0
SNCA-209ENST00000506244 SFXN3Q9BWM7 321 aa15.03■□□□□ -0
SNCA-209ENST00000506244 PINK1Q9BXM7 581 aa15.03■□□□□ -0
SNCA-209ENST00000506244 BCL2L10Q9HD36 194 aa15.03■□□□□ -0
SNCA-209ENST00000506244 SERINC1Q9NRX5 453 aa15.03■□□□□ -0
SNCA-209ENST00000506244 MCTS1Q9ULC4 181 aaKnown RBP15.03■□□□□ -0
SNCA-209ENST00000506244 ZNF232Q9UNY5 417 aa15.03■□□□□ -0
SNCA-209ENST00000506244 IFT52Q9Y366 437 aa15.03■□□□□ -0
SNCA-209ENST00000506244 SPIN1Q9Y657 262 aaPredicted RBP15.03■□□□□ -0
SNCA-209ENST00000506244 HNRNPRO43390 633 aaKnown RBP15.02■□□□□ -0
SNCA-209ENST00000506244 CCDC22O60826 627 aa15.02■□□□□ -0
SNCA-209ENST00000506244 RCBTB2O95199 551 aa15.02■□□□□ -0
SNCA-209ENST00000506244 NTN1O95631 604 aa15.02■□□□□ -0
SNCA-209ENST00000506244 CRHP06850 196 aa15.02■□□□□ -0
SNCA-209ENST00000506244 COX6B1P14854 86 aa15.02■□□□□ -0
SNCA-209ENST00000506244 ETS2P15036 469 aa15.02■□□□□ -0
SNCA-209ENST00000506244 GPX2P18283 190 aa15.02■□□□□ -0
SNCA-209ENST00000506244 BMP5P22003 454 aa15.02■□□□□ -0
SNCA-209ENST00000506244 EIF1AXP47813 144 aaKnown RBP15.02■□□□□ -0
SNCA-209ENST00000506244 CLDN15P56746 228 aa15.02■□□□□ -0
SNCA-209ENST00000506244 SF3A3Q12874 501 aaKnown RBP eCLIP15.02■□□□□ -0
SNCA-209ENST00000506244 KLF10Q13118 480 aa15.02■□□□□ -0
SNCA-209ENST00000506244 CYP51A1Q16850 503 aa15.02■□□□□ -0
SNCA-209ENST00000506244 MRPL2Q5T653 305 aaKnown RBP15.02■□□□□ -0
SNCA-209ENST00000506244 SPATA21Q7Z572 469 aa15.02■□□□□ -0
SNCA-209ENST00000506244 KRT73Q86Y46 540 aa15.02■□□□□ -0
SNCA-209ENST00000506244 LILRA2Q8N149 483 aa15.02■□□□□ -0
SNCA-209ENST00000506244 NAXEQ8NCW5 288 aa15.02■□□□□ -0
SNCA-209ENST00000506244 OR52P1PQ8NH57 321 aa15.02■□□□□ -0
SNCA-209ENST00000506244 OR2V1Q8NHB1 315 aa15.02■□□□□ -0
SNCA-209ENST00000506244 ZG16BQ96DA0 208 aa15.02■□□□□ -0
SNCA-209ENST00000506244 ANKRD27Q96NW4 1050 aa15.02■□□□□ -0
SNCA-209ENST00000506244 SH3GL1Q99961 368 aa15.02■□□□□ -0
SNCA-209ENST00000506244 SPATA5L1Q9BVQ7 753 aa15.02■□□□□ -0
SNCA-209ENST00000506244 TMEM38AQ9H6F2 299 aa15.02■□□□□ -0
SNCA-209ENST00000506244 TMEM185BQ9H7F4 350 aa15.02■□□□□ -0
SNCA-209ENST00000506244 TIGARQ9NQ88 270 aa15.02■□□□□ -0
SNCA-209ENST00000506244 ACER3Q9NUN7 267 aa15.02■□□□□ -0
SNCA-209ENST00000506244 DNAJB12Q9NXW2 375 aaKnown RBP15.02■□□□□ -0
SNCA-209ENST00000506244 ANGPT4Q9Y264 503 aa15.02■□□□□ -0
SNCA-209ENST00000506244 ZNF443Q9Y2A4 671 aaPredicted RBP15.02■□□□□ -0
SNCA-209ENST00000506244 PCNX3Q9H6A9 2034 aa15.02□□□□□ -0.01
SNCA-209ENST00000506244 NKX2-6A6NCS4 301 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 KDM4EB2RXH2 506 aaPredicted RBP15.01□□□□□ -0.01
SNCA-209ENST00000506244 ADAMDEC1O15204 470 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 SYNGR4O95473 234 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 NPPAP01160 153 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 NUDT7P0C024 238 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 SLC6A2P23975 617 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 SLC7A1P30825 629 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 LSP1P33241 339 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 HTR3AP46098 478 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 ASCL1P50553 236 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 ZNF136P52737 540 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 SUCLG1P53597 346 aaKnown RBP15.01□□□□□ -0.01
SNCA-209ENST00000506244 CDK6Q00534 326 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 CYLC2Q14093 348 aaPredicted RBP15.01□□□□□ -0.01
SNCA-209ENST00000506244 PON3Q15166 354 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 MAPK11Q15759 364 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 TOMM34Q15785 309 aaPredicted RBP15.01□□□□□ -0.01
SNCA-209ENST00000506244 RUNDC3AQ59EK9 446 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 RPS26P11Q5JNZ5 115 aaPredicted RBP15.01□□□□□ -0.01
SNCA-209ENST00000506244 HBMQ6B0K9 141 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 REEP3Q6NUK4 255 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 HMGN2P46Q86SG4 172 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 RETREG3Q86VR2 466 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms