RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 MMP25Q9NPA2 562 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 RNF146Q9NTX7 359 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 DECR2Q9NUI1 292 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PARPBPQ9NWS1 579 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MTMR10Q9NXD2 777 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CYTH4Q9UIA0 394 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 EMCNQ9ULC0 261 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 A0A087X0M5 115 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 A0A1B0GX30 115 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 NKX6-3A6NJ46 265 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RNF212BA8MTL3 300 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 H3BML4 177 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RGS5O15539 181 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 MFN2O95140 757 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 AK1P00568 194 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ODC1P11926 461 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 COX4I1P13073 169 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 IGFBP6P24592 240 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 TIMP3P35625 211 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 BRCC3P46736 316 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 GPR15P49685 360 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 MESP2Q0VG99 397 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 GPR176Q14439 515 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RBMS2Q15434 407 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 KLHL22Q53GT1 634 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RNASE10Q5GAN6 216 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 LRIF1Q5T3J3 769 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RNLSQ5VYX0 342 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 KCTD9Q7L273 389 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PGAM4Q8N0Y7 254 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 NUBPLQ8TB37 319 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 UPRTQ96BW1 309 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 FOXRED1Q96CU9 486 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PWWP2AQ96N64 755 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 MBOAT4Q96T53 435 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 GABARAPL1Q9H0R8 117 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SAV1Q9H4B6 383 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 AKTIPQ9H8T0 292 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RNF121Q9H920 327 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RNF181Q9P0P0 153 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PIPOXQ9P0Z9 390 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PPIEQ9UNP9 301 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 POFUT2Q9Y2G5 429 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SCN1AP35498 2009 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 CKAP5Q14008 2032 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 E5RI56 91 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 FXYD1O00168 92 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SIGLEC5O15389 551 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ECI2O75521 394 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 OR2A4O95047 310 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 IL1AP01583 271 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 IFNA6P05013 189 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 CRYBA1P05813 215 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 METTL15P1P0C7V9 234 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 TFPIP10646 304 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 HLA-GP17693 338 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 IL12RB1P42701 662 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ZFP36L2P47974 494 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SLC1A6P48664 564 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 LIG4P49917 911 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ZP1P60852 638 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 RAE1P78406 368 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 NKX6-1P78426 367 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ROM1Q03395 351 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ZFP36L1Q07352 338 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ARHGEF7Q14155 803 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 HLXQ14774 488 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 TEAD2Q15562 447 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PCGF3Q3KNV8 242 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PYCR3Q53H96 274 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 COQ5Q5HYK3 327 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 FAM74A1Q5RGS3 127 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SLC46A3Q7Z3Q1 461 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 MRGPRGQ86SM5 289 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PRSS58Q8IYP2 241 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 HDDC3Q8N4P3 179 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 DHRSXQ8N5I4 330 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 NUDT10Q8NFP7 164 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SEMA4DQ92854 862 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 MRGPRFQ96AM1 343 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 NUDT11Q96G61 164 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PEX11GQ96HA9 241 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 CAPNS2Q96L46 248 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 OR2A7Q96R45 310 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 OR14A2Q96R54 314 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ELOVL1Q9BW60 279 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 HDHD2Q9H0R4 259 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF768Q9H5H4 540 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 SLC6A20Q9NP91 592 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF302Q9NR11 478 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PPP4R1LQ9P1A2 415 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 MUTYHQ9UIF7 546 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PIN4Q9Y237 131 aaKnown RBP2.09□□□□□ -2.07
NEDD4-205ENST00000506154 B3GALT1Q9Y5Z6 326 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 WDFY3Q8IZQ1 3526 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PPIAL4EA0A075B759 164 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 PPIAL4CA0A0B4J2A2 164 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 IQCMA0A1B0GVH7 501 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 A0A1W2PPE3 182 aa2.09□□□□□ -2.07
NEDD4-205ENST00000506154 A0A1W2PR48 441 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms