RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 ACP5P13686 325 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 HTR1FP30939 366 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 IFNGR2P38484 337 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 GMFBP60983 142 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 RPS27AP62979 156 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 UBA52P62987 128 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 TSPAN31Q12999 210 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 SLBPQ14493 270 aaKnown RBP eCLIP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 CCSMST1Q4G0I0 132 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 FCRLBQ6BAA4 426 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 ELP2Q6IA86 826 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 CDC73Q6P1J9 531 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 MTFR2Q6P444 385 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 USP53Q70EK8 1073 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 ISG20L2Q9H9L3 353 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 ZNF334Q9HCZ1 680 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 CKAP5Q14008 2032 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 EFCAB7A8K855 629 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 EIF4E2O60573 245 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 DUSP11O75319 330 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 PTGFRP43088 359 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 KRT33BQ14525 404 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 CXCL17Q6UXB2 119 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 APCDD1Q8J025 514 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 OR2AP1Q8NGE2 309 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 MS4A4EQ96PG1 132 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 ZFP57Q9NU63 452 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 MRPL15Q9P015 296 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 MIOXQ9UGB7 285 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 KLF15Q9UIH9 416 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 MKL2Q9ULH7 1088 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 SLC22A7Q9Y694 548 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 H7C4K7 107 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 J3QRE1 110 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 M0R3H8 397 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 TGFB1P01137 390 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 C1GALT1C1LP0DN25 315 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 H2BFSP57053 126 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 AP3S2P59780 193 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 LSM11P83369 360 aaKnown RBP eCLIP16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 TRAM1Q15629 374 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 KCNA10Q16322 511 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 CCL14Q16627 93 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 GUCA2BQ16661 112 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 C6orf120Q7Z4R8 191 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 PXKQ7Z7A4 578 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 COMTD1Q86VU5 262 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 NR4A3Q92570 626 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 ZNF707Q96C28 371 aaPredicted RBP16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 OR1F2PQ96R84 312 aa16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 CPEB1Q9BZB8 566 aaKnown RBP16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 SEBOXQ9HB31 216 aaPredicted RBP16.59■□□□□ 0.25
POLR2J3-209ENST00000504157 MEX3AA1L020 520 aaKnown RBP16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 RAB19A4D1S5 217 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 WRBO00258 174 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 LCMT2O60294 686 aaKnown RBP16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 HEXAP06865 529 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 ASGR2P07307 311 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 MGMTP16455 207 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 LAG3P18627 525 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 ANXA7P20073 488 aaKnown RBP16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 PTAFRP25105 342 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 IL10RAQ13651 578 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 MANEAQ5SRI9 462 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 RBMS3Q6XE24 437 aaKnown RBP16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 SKA3Q8IX90 412 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 TMEM185AQ8NFB2 350 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 OR4D9Q8NGE8 314 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 RAB8BQ92930 207 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 PBX4Q9BYU1 374 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 MFFQ9GZY8 342 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 P2RX2Q9UBL9 471 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 MAFFQ9ULX9 164 aa16.58■□□□□ 0.25
POLR2J3-209ENST00000504157 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SAP18O00422 153 aaKnown RBP16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SURF4O15260 269 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 B4GALT2O60909 372 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 AKR1A1P14550 325 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SNRPBP14678 240 aaKnown RBP16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 STAT5AP42229 794 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 FRKP42685 505 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 PSMD4P55036 377 aaKnown RBP16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SP3Q02447 781 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 ECH1Q13011 328 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 ARSIQ5FYB1 569 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 C10orf91Q5T1B1 145 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 ZNF613Q6PF04 617 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 ESPNLQ6ZVH7 1005 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SLC24A5Q71RS6 500 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 CEACAM19Q7Z692 300 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SMPDL3AQ92484 453 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 TEX12Q9BXU0 123 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 SIRT3Q9NTG7 399 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 DYRK1BQ9Y463 629 aa16.58■□□□□ 0.24
POLR2J3-209ENST00000504157 ZNF749O43361 778 aa16.57■□□□□ 0.24
POLR2J3-209ENST00000504157 NPPBP16860 134 aa16.57■□□□□ 0.24
POLR2J3-209ENST00000504157 SYN1P17600 705 aa16.57■□□□□ 0.24
POLR2J3-209ENST00000504157 ATF1P18846 271 aa16.57■□□□□ 0.24
POLR2J3-209ENST00000504157 CAP1Q01518 475 aa16.57■□□□□ 0.24
POLR2J3-209ENST00000504157 MAPK14Q16539 360 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms