RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 VPS35Q96QK1 796 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 TM2D1Q9BX74 207 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 IKZF5Q9H5V7 419 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 COG4Q9H9E3 785 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 PNO1Q9NRX1 252 aaKnown RBP2.35□□□□□ -2.03
GYPB-203ENST00000503255 ADAM22Q9P0K1 906 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 ANKMY1Q9P2S6 941 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 ATXN10Q9UBB4 475 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 Q9UF83 564 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 CYTH4Q9UIA0 394 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 SMC3Q9UQE7 1217 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 CHMP2BQ9UQN3 213 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 KIF3AQ9Y496 699 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 GMPPBQ9Y5P6 360 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 EVC2Q86UK5 1308 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 TTC21AQ8NDW8 1320 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 CENPJQ9HC77 1338 aaPredicted RBP2.35□□□□□ -2.03
GYPB-203ENST00000503255 PARD3Q8TEW0 1356 aa2.35□□□□□ -2.03
GYPB-203ENST00000503255 TOPAZ1Q8N9V7 1692 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 LMO7Q8WWI1 1683 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 THSD7AQ9UPZ6 1657 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CAMTA1Q9Y6Y1 1673 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 NCAPD2Q15021 1401 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 PARP4Q9UKK3 1724 aaKnown RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 ATP7BP35670 1465 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 RGPD3A6NKT7 1758 aaPredicted RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 RGPD4Q7Z3J3 1758 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 EPOPA6NHQ4 379 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 DHRS7CA6NNS2 312 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 E9PLD3 99 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 WWP2O00308 870 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 HDAC3O15379 428 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CLDN3O15551 220 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CABYRO75952 493 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 NOL4O94818 638 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CA3P07451 260 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 STSP08842 583 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 GIG44P09565 113 aaPredicted RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 ANXA3P12429 323 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 ZNF32P17041 273 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 HMGB2P26583 209 aaKnown RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 PTBP1P26599 531 aaKnown RBP eCLIP2.34□□□□□ -2.03
GYPB-203ENST00000503255 RPA1P27694 616 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 IL2RGP31785 369 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CDH5P33151 784 aaPredicted RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 NTHL1P78549 312 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 PDZK1IP1Q13113 114 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 SCGB2A2Q13296 93 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 KCNJ11Q14654 390 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 SBK1Q52WX2 424 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 UNC5DQ6UXZ4 953 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 DEFB132Q7Z7B7 95 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 CBWD2Q8IUF1 395 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 ANKRD49Q8WVL7 239 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 VSIG2Q96IQ7 327 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 TSSK1BQ9BXA7 367 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 GSDMCQ9BYG8 508 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 SLC25A51Q9H1U9 297 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 ECT2Q9H8V3 914 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 MEPEQ9NQ76 525 aaPredicted RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 ACTR3BQ9P1U1 418 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 DUSP12Q9UNI6 340 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 SAMD4AQ9UPU9 718 aaKnown RBP2.34□□□□□ -2.03
GYPB-203ENST00000503255 U3KQV3 271 aa2.34□□□□□ -2.03
GYPB-203ENST00000503255 TTC21BQ7Z4L5 1316 aa2.34□□□□□ -2.04
GYPB-203ENST00000503255 TRPM1Q7Z4N2 1603 aa2.34□□□□□ -2.04
GYPB-203ENST00000503255 KIAA0232Q92628 1395 aa2.34□□□□□ -2.04
GYPB-203ENST00000503255 PHRF1Q9P1Y6 1649 aaKnown RBP2.33□□□□□ -2.04
GYPB-203ENST00000503255 B4DXG7 233 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 F8WDY8 70 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 TBL1XO60907 577 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 SCGB2A1O75556 95 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 AKR7A3O95154 331 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 LYPD3O95274 346 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 P0C879 139 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 PDHBP11177 359 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 PSMB1P20618 241 aaKnown RBP2.33□□□□□ -2.04
GYPB-203ENST00000503255 ATP5A1P25705 553 aaKnown RBP2.33□□□□□ -2.04
GYPB-203ENST00000503255 EFNA3P52797 238 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 CEBPEQ15744 281 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 PRR4Q16378 134 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 ADPRMQ3LIE5 342 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 CCDC92Q53HC0 331 aaPredicted RBP2.33□□□□□ -2.04
GYPB-203ENST00000503255 HSP90AA5PQ58FG0 334 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 ZNF57Q68EA5 555 aaPredicted RBP2.33□□□□□ -2.04
GYPB-203ENST00000503255 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 UFSP1Q6NVU6 142 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 NIPAL3Q6P499 406 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 SLC39A4Q6P5W5 647 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 SYT10Q6XYQ8 523 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 STAC2Q6ZMT1 411 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 CATSPER4Q7RTX7 472 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 ANKRD37Q7Z713 158 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 GCNT2Q8N0V5 402 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
GYPB-203ENST00000503255 OR2L5Q8NG80 312 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 ADAMTS16Q8TE57 1224 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 SELENOMQ8WWX9 145 aa2.33□□□□□ -2.04
GYPB-203ENST00000503255 C18orf25Q96B23 403 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms